RNA–Protein interactions for RNA: ENST00000521216.5

SKP1-208, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SKP1, Length 899 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-208ENST00000521216 SUFUQ9UMX1 484 aa5.63□□□□□ -1.51
SKP1-208ENST00000521216 ZNF804BA4D1E1 1349 aa5.63□□□□□ -1.51
SKP1-208ENST00000521216 DNAJC9-AS1A6NH13 148 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 KCNJ18B7U540 433 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 PRPF4O43172 522 aaKnown RBP eCLIP5.62□□□□□ -1.51
SKP1-208ENST00000521216 TLR2O60603 784 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 CNPP09543 421 aaKnown RBP5.62□□□□□ -1.51
SKP1-208ENST00000521216 ARSAP15289 507 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 RHAGQ02094 409 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 KLF9Q13886 244 aaPredicted RBP5.62□□□□□ -1.51
SKP1-208ENST00000521216 RABEP1Q15276 862 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 ETFDHQ16134 617 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 HMBOX1Q6NT76 420 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 GALNT7Q86SF2 657 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 SUGP2Q8IX01 1082 aaKnown RBP eCLIP5.62□□□□□ -1.512e-6■■■□□ 18.1
SKP1-208ENST00000521216 USP13Q92995 863 aaPredicted RBP5.62□□□□□ -1.51
SKP1-208ENST00000521216 RPL36ALQ969Q0 106 aaKnown RBP5.62□□□□□ -1.51
SKP1-208ENST00000521216 EME1Q96AY2 570 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 MASTLQ96GX5 879 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 REEP2Q9BRK0 252 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 CADM1Q9BY67 442 aaKnown RBP5.62□□□□□ -1.51
SKP1-208ENST00000521216 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.62□□□□□ -1.513e-12■■■■□ 26.6
SKP1-208ENST00000521216 ZNF304Q9HCX3 659 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 SLC22A11Q9NSA0 550 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 GTF2A1LQ9UNN4 478 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 BTBD3Q9Y2F9 522 aa5.62□□□□□ -1.51
SKP1-208ENST00000521216 LRRFIP2Q9Y608 721 aaKnown RBP5.62□□□□□ -1.51
SKP1-208ENST00000521216 NCAM2O15394 837 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 STRNO43815 780 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 TSPAN3O60637 253 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 CBX6O95503 412 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 METTL18O95568 372 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 HLA-DQA2P01906 255 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 FCGR2AP12318 317 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 MVDP53602 400 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 GAD2Q05329 585 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 BYSLQ13895 437 aaKnown RBP5.61□□□□□ -1.51
SKP1-208ENST00000521216 SH2D4BQ5SQS7 431 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 PXDC1Q5TGL8 231 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 FAM171A1Q5VUB5 890 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 ATG16L1Q676U5 607 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 DENND1BQ6P3S1 775 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 DDIASQ8IXT1 998 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 USP38Q8NB14 1042 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 HERVK_113Q902F9 699 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 RNFT2Q96EX2 444 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 SPRTNQ9H040 489 aaPredicted RBP5.61□□□□□ -1.51
SKP1-208ENST00000521216 STN1Q9H668 368 aaKnown RBP5.61□□□□□ -1.51
SKP1-208ENST00000521216 Q9N2J8 555 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 TUBA8Q9NY65 449 aaPredicted RBP5.61□□□□□ -1.51
SKP1-208ENST00000521216 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 C9orf78Q9NZ63 289 aaPredicted RBP5.61□□□□□ -1.51
SKP1-208ENST00000521216 AGO2Q9UKV8 859 aaKnown RBP5.61□□□□□ -1.51
SKP1-208ENST00000521216 GDAQ9Y2T3 454 aa5.61□□□□□ -1.51
SKP1-208ENST00000521216 ZMYM2Q9UBW7 1377 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 ZNF335Q9H4Z2 1342 aaPredicted RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 KIR2DS5A0A0G2JLQ3 304 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 A0A1W2PPC1 479 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 KIR2DS3K7RE56 304 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 DHX16O60231 1041 aaKnown RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 NEURL1O76050 574 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 WNT1P04628 370 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 PRKCHP24723 683 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 SKIV2L2P42285 1042 aaKnown RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 SSBP2P81877 361 aaPredicted RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 CHRNDQ07001 517 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 IL13RA2Q14627 380 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 RBMS2Q15434 407 aaKnown RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 SMTNL2Q2TAL5 461 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 C5orf22Q49AR2 442 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 ALG10Q5BKT4 473 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 ALG10BQ5I7T1 473 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 C10orf25Q5T742 122 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 MAP3K21Q5TCX8 1036 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 ISM2Q6H9L7 571 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 SLC44A5Q8NCS7 719 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 WIPF2Q8TF74 440 aaPredicted RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 IGFBPL1Q8WX77 278 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 NCSTNQ92542 709 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 EIF2AK1Q9BQI3 630 aaKnown RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 IFT27Q9BW83 186 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 FRMD8Q9BZ67 464 aaPredicted RBP5.6□□□□□ -1.51
SKP1-208ENST00000521216 THSD1Q9NS62 852 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 UPB1Q9UBR1 384 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 COG5Q9UP83 839 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 DHDHQ9UQ10 334 aa5.6□□□□□ -1.51
SKP1-208ENST00000521216 TRBV5-3A0A0A0MS03 114 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 FOXO6A8MYZ6 492 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 FGBP02675 491 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 CD72P21854 359 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 CCR5P51681 352 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 MTX1Q13505 466 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 TRPC3Q13507 836 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 TDGQ13569 410 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 SEMA3AQ14563 771 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 TTC39AQ5SRH9 613 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 C6orf10Q5SRN2 563 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 TTLL5Q6EMB2 1281 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 DEF8Q6ZN54 512 aa5.59□□□□□ -1.51
SKP1-208ENST00000521216 IGFN1Q86VF2 1251 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms