RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CDH17Q12864 832 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 EFCAB12Q6NXP0 572 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TAF2Q6P1X5 1199 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ABRAXAS1Q6UWZ7 409 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 FAM83AQ86UY5 434 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 FAM131BQ86XD5 332 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 BBS5Q8N3I7 341 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF280CQ8ND82 737 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 NCLNQ969V3 563 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 DHRS4Q9BTZ2 278 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 C8orf4Q9NR00 106 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 DAPK2Q9UIK4 370 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TRHDEQ9UKU6 1024 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 UBR2Q8IWV8 1755 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CNTNAP2Q9UHC6 1331 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ANKRD33BA6NCL7 494 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 DFFAO00273 331 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 MATN2O00339 956 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 DHX15O43143 795 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 HBP1O60381 514 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SNRPB2P08579 225 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 GFAPP14136 432 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF12P17014 697 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TNFSF9P41273 254 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ETV4P43268 484 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 OGDHQ02218 1023 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 BST2Q10589 180 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TRAF2Q12933 501 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 FRG1Q14331 258 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 HERC3Q15034 1050 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CTC1Q2NKJ3 1217 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SLC39A4Q6P5W5 647 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SH3BP5LQ7L8J4 393 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PSTKQ8IV42 348 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 APPL2Q8NEU8 664 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 HM13Q8TCT9 377 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF395Q9H8N7 513 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 KCNK13Q9HB14 408 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 EURLQ9NYK6 297 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PADI4Q9UM07 663 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 NAV1Q8NEY1 1877 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 M0QYT0 321 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 NR5A2O00482 541 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PHGDHO43175 533 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 DENRO43583 198 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ITM2AO43736 263 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SNAP91O60641 907 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SNX2O60749 519 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SUPT7LO94864 414 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 APBA3O96018 575 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CST3P01034 146 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 LDLRP01130 860 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PDGFRBP09619 1106 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 IL1R2P27930 398 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PSMB4P28070 264 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 LRPAP1P30533 357 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TRPC1P48995 793 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 OAZ1P54368 228 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PEX6Q13608 980 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 HNRNPDQ14103 355 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 NEDD8Q15843 81 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TMEM63BQ5T3F8 832 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TRMT10BQ6PF06 316 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PIWIL4Q7Z3Z4 852 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 IGDCC3Q8IVU1 814 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SCUBE3Q8IX30 993 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ATPAF2Q8N5M1 289 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TTLL6Q8N841 843 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 FAM47BQ8NA70 645 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 IPMKQ8NFU5 416 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TFAP2BQ92481 460 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 DACH2Q96NX9 599 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PLEKHG4BQ96PX9 1271 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 MMP19Q99542 508 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ACO2Q99798 780 aaKnown RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 KLHL25Q9H0H3 589 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 WDR55Q9H6Y2 383 aaPredicted RBP6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TBCCD1Q9NVR7 557 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SYBUQ9NX95 663 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 STK32BQ9NY57 414 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CCDC167Q9P0B6 97 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ANGPTL3Q9Y5C1 460 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 PCDHAC2Q9Y5I4 1007 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 A0A1B0GUL6 1792 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ANKRD36CQ5JPF3 1778 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 VWA5AO00534 786 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 UGT1A9O60656 530 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 RFPL1O75677 317 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 APOA1P02647 267 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CAPSQ13938 189 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 TTLL4Q14679 1199 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SPDYE2Q495Y8 402 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 FKBP1CQ5VVH2 108 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 MBLAC2Q68D91 279 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 CMC1Q7Z7K0 106 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 ZNF410Q86VK4 478 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 KIAA2013Q8IYS2 634 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 SLC7A14Q8TBB6 771 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 USP33Q8TEY7 942 aa6.78□□□□□ -1.32
CPNE3-203ENST00000517490 QKIQ96PU8 341 aaKnown RBP eCLIP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms