RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 ULBP1Q9BZM6 244 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CDT1Q9H211 546 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 XPNPEP3Q9NQH7 507 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 HBS1LQ9Y450 684 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 HEATR9A2RTY3 570 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRUB2O95900 331 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PGK1P00558 417 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 THRAP10827 490 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 YBX3P16989 372 aaKnown RBP eCLIP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MLH1P40692 756 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PSEN2P49810 448 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 NEK3P51956 506 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CHN2P52757 468 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 OXCT1P55809 520 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PRKD1Q15139 912 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 HSDL1Q3SXM5 330 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 LIN52Q52LA3 116 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZNF280DQ6N043 979 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 KYAT3Q6YP21 454 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CYGBQ8WWM9 190 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MRPS31Q92665 395 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 SENP8Q96LD8 212 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 C7orf26Q96N11 449 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 SIKE1Q9BRV8 207 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TINF2Q9BSI4 451 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 S100A14Q9HCY8 104 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 SORCS3Q9UPU3 1222 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 ZNF711Q9Y462 761 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CLUHO75153 1309 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PQBP1O60828 265 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CLASP2O75122 1294 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 LRCH4O75427 683 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 T-ENOLP0DO92 83 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 AKR1A1P14550 325 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 ATP6V1E1P36543 226 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 HDAC4P56524 1084 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 CRADDP78560 199 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 WASHC5Q12768 1159 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 GTF2H3Q13889 308 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PTPN20Q4JDL3 420 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 WSCD1Q658N2 575 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TAGAPQ8N103 731 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 C12orf29Q8N999 325 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 USP13Q92995 863 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 ADAM2Q99965 735 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 THUMPD3Q9BV44 507 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MTIF3Q9H2K0 278 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 WWOXQ9NZC7 414 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 FETUBQ9UGM5 382 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 RNF112Q9ULX5 631 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 NPM3O75607 178 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRIM16O95361 564 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 RAB27AP51159 221 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 RPS6KA3P51812 740 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 RTP1P59025 263 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 DAB2P98082 770 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 POLD3Q15054 466 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 FAM182AQ5T1J6 154 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 TIGD7Q6NT04 549 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 AAGABQ6PD74 315 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 MTG1Q9BT17 334 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 UBE2OQ9C0C9 1292 aaKnown RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PDGFDQ9GZP0 370 aaPredicted RBP11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 PDGFCQ9NRA1 345 aa11.04□□□□□ -0.64
PCDHGA1-202ENST00000517417 UTRNP46939 3433 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TPP1O14773 563 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SCAMP3O14828 347 aaKnown RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 APOA4P06727 396 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 BPGMP07738 259 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SCNN1GP51170 649 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 NRLP54845 237 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 OCA2Q04671 838 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC39A4Q6P5W5 647 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TMC7Q7Z402 723 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 RNF148Q8N7C7 305 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 NAT8LQ8N9F0 302 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 ARRDC4Q8NCT1 418 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SLC35B2Q8TB61 432 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 GRIP2Q9C0E4 1043 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TMEM134Q9H6X4 195 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 DSEQ9UL01 958 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 ATRNL1Q5VV63 1379 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 VNN1O95497 513 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 OR1E1P30953 314 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 CDK7P50613 346 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 OASLQ15646 514 aaKnown RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SPDYE7PQ495Y7 208 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 SEL1L3Q68CR1 1132 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TDRD5Q8NAT2 981 aaKnown RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 NETO2Q8NC67 525 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 CAAP1Q9H8G2 361 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 HPS4Q9NQG7 708 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 RIC8BQ9NVN3 520 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 NFASCO94856 1347 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRPC5OSA6NMA1 111 aa11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TRAFD1O14545 582 aaPredicted RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 DHX15O43143 795 aaKnown RBP11.03□□□□□ -0.64
PCDHGA1-202ENST00000517417 TBC1D12O60347 775 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms