RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, human

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-231	ENST00000515620	TAS1R2	Q8TE23	839 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	KLK6	Q92876	244 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	TATDN2	Q93075	761 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	GRAMD1A	Q96CP6	724 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	SGF29	Q96ES7	293 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	SPAG5	Q96R06	1193 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	C7orf25	Q9BPX7	421 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	DUSP23	Q9BVJ7	150 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	IRX2	Q9BZI1	471 aa	Predicted RBP	10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	ABCC13	Q9NSE7	274 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	DMAC2	Q9NW81	257 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	DNAJC28	Q9NX36	388 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	SEPT3	Q9UH03	358 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	SARDH	Q9UL12	918 aa		10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	SPTAN1	Q13813	2472 aa	Known RBP	10.84	□□□□□ -0.67
CLDND1-231	ENST00000515620	NOTCH2	Q04721	2471 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	IKBKB	O14920	756 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	XPO1	O14980	1071 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	RNGTT	O60942	597 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	LUC7L3	O95232	432 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	GJB6	O95452	261 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	NR3C1	P04150	777 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	ITGA2B	P08514	1039 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	TRIM49	P0CI25	452 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	TRIM49C	P0CI26	452 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	GCLM	P48507	274 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	RAD23B	P54727	409 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	SRSF6	Q13247	344 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	SLC39A14	Q15043	492 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	CEP135	Q66GS9	1140 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	ARHGAP17	Q68EM7	881 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	ZCCHC8	Q6NZY4	707 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	MSANTD2	Q6P1R3	559 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	DSG4	Q86SJ6	1040 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	SLC9A9	Q8IVB4	645 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	SLC22A18AS	Q8N1D0	253 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	CCDC150	Q8NCX0	1101 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	WDR36	Q8NI36	951 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	OR8D1	Q8WZ84	308 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	NOX5	Q96PH1	765 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	NUCKS1	Q9H1E3	243 aa	Known RBP	10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	MMRN2	Q9H8L6	949 aa		10.83	□□□□□ -0.68
CLDND1-231	ENST00000515620	CCDC187	A0A096LP49	1063 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620		A0A1W2PQU0	124 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	CASC3	O15234	703 aa	Known RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	PPFIA2	O75334	1257 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	SFTPC	P11686	197 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	CR2	P20023	1033 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	AKT2	P31751	481 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	NNMT	P40261	264 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	MLLT3	P42568	568 aa	Predicted RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	VAMP7	P51809	220 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	PDX1	P52945	283 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	TBX4	P57082	545 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	CLDN2	P57739	230 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	TAS2R38	P59533	333 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	DRAP1	Q14919	205 aa	Predicted RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	TGIF1	Q15583	401 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	DCAF6	Q58WW2	860 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	FAM46C	Q5VWP2	391 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	OR6B2	Q6IFH4	312 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	PTAR1	Q7Z6K3	402 aa	Predicted RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	JAML	Q86YT9	394 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	IQUB	Q8NA54	791 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	ZNF548	Q8NEK5	533 aa	Predicted RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	USP28	Q96RU2	1077 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	DDX50	Q9BQ39	737 aa	Known RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	SYNDIG1	Q9H7V2	258 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	PREB	Q9HCU5	417 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	CISH	Q9NSE2	258 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	TSPAN16	Q9UKR8	245 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	FRMD4B	Q9Y2L6	1034 aa		10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	MORC2	Q9Y6X9	1032 aa	Predicted RBP	10.82	□□□□□ -0.68
CLDND1-231	ENST00000515620	C1QTNF3-AMACR	E9PGA6	284 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	MUSK	O15146	869 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	TCEA3	O75764	348 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	GABBR2	O75899	941 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	MOCS2	O96007	188 aa	Predicted RBP	10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	LCP1	P13796	627 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	SLC5A2	P31639	672 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	INHBC	P55103	352 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	DAOA	P59103	153 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	HNRNPK	P61978	463 aa	Known RBP eCLIP	10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	PPP3CA	Q08209	521 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	BST2	Q10589	180 aa	Known RBP	10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	ZNF284	Q2VY69	593 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	DEFB133	Q30KQ1	61 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	C4orf17	Q53FE4	359 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	MS4A13	Q5J8X5	152 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	PERM1	Q5SV97	790 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	GCNT7	Q6ZNI0	430 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	LGI2	Q8N0V4	545 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	TPCN2	Q8NHX9	752 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	FRS2	Q8WU20	508 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	IFT43	Q96FT9	208 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	SEMA3C	Q99985	751 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	NCKIPSD	Q9NZQ3	722 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	HESX1	Q9UBX0	185 aa		10.81	□□□□□ -0.68
CLDND1-231	ENST00000515620	PAXBP1	Q9Y5B6	917 aa		10.81	□□□□□ -0.68

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