RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 NEU2Q9Y3R4 380 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PLXNB2O15031 1838 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 C1orf232A0A0U1RR37 186 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 FOXO6A8MYZ6 492 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 LINC01387J3KSC0 135 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 K7ERI5 159 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SOCS7O14512 581 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 MSCO60682 206 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 MAFO75444 373 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 TRMUO75648 421 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ARIH2O95376 493 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 POP4O95707 220 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SELLP14151 372 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 HPGDP15428 266 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 GM2AP17900 193 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 CXCR2P25025 360 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ENTPD1P49961 510 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 EIF3BP55884 814 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SSTP61278 116 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 MOGSQ13724 837 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC29A2Q14542 456 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PON2Q15165 354 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 MAPK6Q16659 721 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PGM2L1Q6PCE3 622 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ASRGL1Q7L266 308 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ANKRD35Q8N283 1001 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 C1orf54Q8WWF1 131 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC9A6Q92581 669 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC39A13Q96H72 371 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 CMTM3Q96MX0 182 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 MSTO1Q9BUK6 570 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 C10orf88Q9H8K7 445 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 DNAJC17Q9NVM6 304 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PAQR5Q9NXK6 330 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 IL37Q9NZH6 218 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ANKFY1Q9P2R3 1169 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 TRPS1Q9UHF7 1281 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 STARD13Q9Y3M8 1113 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 TCRBV5S1A1TA0A578 114 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 HNRNPCL2B2RXH8 293 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 POLR1CO15160 346 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ALOX15BO15296 676 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 RIPK2O43353 540 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SSX5O60225 188 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 HNRNPCL1O60812 293 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 TOMM70O94826 608 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ALX3O95076 343 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 CST3P01034 146 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 FGFR4P22455 802 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 NR4A1P22736 598 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 TARSP26639 723 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 TAS2R40P59535 323 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PTK2BQ14289 1009 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SGCAQ16586 387 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ZNF792Q3KQV3 632 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 WDR72Q3MJ13 1102 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 WASHC2DQ5SRD0 308 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 C6orf163Q5TEZ5 329 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 STRA8Q7Z7C7 330 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PRUNE1Q86TP1 453 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PHF13Q86YI8 300 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ABRAQ8N0Z2 381 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 Q8N9G6 341 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 FAM13CQ8NE31 585 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ATG4AQ8WYN0 398 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 BRD7Q9NPI1 651 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 SACM1LQ9NTJ5 587 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 CNTN3Q9P232 1028 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 CPNE7Q9UBL6 633 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 PNMA3Q9UL41 463 aa7.63□□□□□ -1.19
PDLIM5-219ENST00000514743 ARHGEF37A1IGU5 675 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC9A3R1O14745 358 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 KPNA5O15131 536 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 CLOCKO15516 846 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ADAMTS4O75173 837 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PROSCO94903 275 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 SEMA3DO95025 777 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 GJB6O95452 261 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ITGBL1O95965 494 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 GNA15P30679 374 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 GRIA2P42262 883 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 IFNAR2P48551 515 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 NEK3P51956 506 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 IFI35P80217 286 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 OTUD4Q01804 1114 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 ZNF252P-AS1Q0IIN9 211 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 FCHO2Q0JRZ9 810 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 MAMLD1Q13495 774 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 SLFN12LQ6IEE8 588 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PLEKHA7Q6IQ23 1121 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 IYDQ6PHW0 289 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 TMEM270Q6UE05 265 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 CCDC105Q8IYK2 499 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 GPC2Q8N158 579 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 SLC44A1Q8WWI5 657 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PGM2Q96G03 612 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 C11orf70Q9BRQ4 267 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PRKAB1Q9Y478 270 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 PCDHGA10Q9Y5H3 936 aa7.62□□□□□ -1.19
PDLIM5-219ENST00000514743 hCG_2039718K7EN88 272 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms