RNA–Protein interactions for RNA: ENST00000514654.5

ATP2C1-222, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2C1, Length 4,730 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-222ENST00000514654 EFL1Q7Z2Z2 1120 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 C11orf74Q86VG3 221 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TNS4Q8IZW8 715 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 IQCKQ8N0W5 287 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 FBXO39Q8N4B4 442 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 INPP5DQ92835 1189 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 CERS2Q96G23 380 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 VPS50Q96JG6 964 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 CSPG4P5Q96PW8 444 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 SLC7A5P2Q9GIP4 190 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 MYLK2Q9H1R3 596 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TMEM161AQ9NX61 479 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TAS2R13Q9NYV9 303 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 FAM32AQ9Y421 112 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 SNX10Q9Y5X0 201 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 PTCH2Q9Y6C5 1203 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 A0A1W2PQH9 124 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TCRBV9S1A1TA0A576 114 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TMEM88BA6NKF7 163 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 DUSP11O75319 330 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 PAGE1O75459 146 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 PDE5AO76074 875 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 KRT16P08779 473 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TNFRSF8P28908 595 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 ATP6V1E1P36543 226 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 KLC1Q07866 573 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 NFYCQ13952 458 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 FASTKD3Q14CZ7 662 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 SLC25A52Q3SY17 297 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 PPP4R4Q6NUP7 873 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 RD3Q7Z3Z2 195 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 RASGEF1CQ8N431 466 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 EIF1ADQ8N9N8 165 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 OR6K2Q8NGY2 324 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 TEKT4Q8WW24 435 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 ATXN2LQ8WWM7 1075 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 LRRC39Q96DD0 335 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 OXNAD1Q96HP4 312 aaPredicted RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 NAF1Q96HR8 494 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 EBNA1BP2Q99848 306 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 ZYG11BQ9C0D3 744 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 RNF39Q9H2S5 420 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 C12orf65Q9H3J6 166 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 ALG9Q9H6U8 611 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 SYBUQ9NX95 663 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 DNMT3LQ9UJW3 386 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 EIF3LQ9Y262 564 aaKnown RBP6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 SNX13Q9Y5W8 968 aa6.28□□□□□ -1.4
ATP2C1-222ENST00000514654 FAM155BO75949 473 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ZBTB48P10074 688 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 FGFR1P11362 822 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 SLC2A4P14672 509 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ATP6V1B1P15313 513 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 PTPN4P29074 926 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 PRKCZQ05513 592 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 KRT72Q14CN4 511 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 PGS1Q32NB8 556 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 PCID2Q5JVF3 399 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 TCHHL1Q5QJ38 904 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CERCAMQ5T4B2 595 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ARMC12Q5T9G4 340 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CACHD1Q5VU97 1274 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 TMEM154Q6P9G4 183 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 DNAJC14Q6Y2X3 702 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 BNC2Q6ZN30 1099 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CMC1Q7Z7K0 106 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CNPY4Q8N129 248 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 MREGQ8N565 214 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 VPS37AQ8NEZ2 397 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CLEC4CQ8WTT0 213 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CKAP2Q8WWK9 683 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 EMILIN2Q9BXX0 1053 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 IL22Q9GZX6 179 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 HIPK3Q9H422 1215 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 FZD8Q9H461 694 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ELOVL6Q9H5J4 265 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 LRRC4CQ9HCJ2 640 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ACSS2Q9NR19 701 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 PACSIN3Q9UKS6 424 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 NR2E3Q9Y5X4 410 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 MYO9BQ13459 2157 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ROBO1Q9Y6N7 1651 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CHD2O14647 1828 aaKnown RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 FGF10O15520 208 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 TBL1XO60907 577 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 DAB1O75553 588 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CPSF4O95639 269 aaKnown RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 STAU1O95793 577 aaKnown RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 HOXC6P09630 235 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CCDC166P0CW27 439 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 HOXD13P35453 343 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 CDKN2BP42772 138 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 PRKAA1Q13131 559 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 HIST2H2ACQ16777 129 aaPredicted RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 USP41Q3LFD5 358 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 NOL9Q5SY16 702 aaKnown RBP6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 HIST2H2AA3Q6FI13 130 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 ANKS3Q6ZW76 656 aa6.27□□□□□ -1.41
ATP2C1-222ENST00000514654 TRMT11Q7Z4G4 463 aaKnown RBP6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms