RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 C11orf57Q6ZUT1 292 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 C14orf80Q86SX3 495 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 SLC47A2Q86VL8 602 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 FAM131CQ96AQ9 280 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 SERAC1Q96JX3 654 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 SPAG5Q96R06 1193 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 ELF4Q99607 663 aaPredicted RBP12.57□□□□□ -0.4
SNHG4-208ENST00000514110 FEM1AQ9BSK4 669 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 PLCB1Q9NQ66 1216 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 DNAJC12Q9UKB3 198 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 GPSM3Q9Y4H4 160 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 HS3ST4Q9Y661 456 aa12.57□□□□□ -0.4
SNHG4-208ENST00000514110 KNL1Q8NG31 2342 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3DA0A087WVF3 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3IA0A087WXS9 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3EA0A087X179 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3KA0A087X1G2 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3FA6NER0 549 aaPredicted RBP12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3LB9A6J9 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 M0QYT0 321 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 LATO43561 262 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 ATP9BO43861 1147 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 PAGE1O75459 146 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 DAB1O75553 588 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3HP0C7X1 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TFE3P19532 575 aaPredicted RBP12.56□□□□□ -0.4
SNHG4-208ENST00000514110 NOS2P35228 1153 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 VASPP50552 380 aaPredicted RBP12.56□□□□□ -0.4
SNHG4-208ENST00000514110 SLC6A3Q01959 620 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 CAMK2BQ13554 666 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 ACCSLQ4AC99 568 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3GQ6DHY5 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3CQ6IPX1 549 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 SLC26A9Q7LBE3 791 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D3Q8IZP1 549 aaPredicted RBP12.56□□□□□ -0.4
SNHG4-208ENST00000514110 SAP25Q8TEE9 199 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 SKA1Q96BD8 255 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 NOX5Q96PH1 765 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 SIK2Q9H0K1 926 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 ANLNQ9NQW6 1124 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 ARHGAP20Q9P2F6 1191 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 FTSJ1Q9UET6 329 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 SLC25A13Q9UJS0 675 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 OR51B4Q9Y5P0 310 aa12.56□□□□□ -0.4
SNHG4-208ENST00000514110 COL5A1P20908 1838 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ADAMTS20P59510 1910 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 CELSR3Q9NYQ7 3312 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 I6L893 689 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 TLR4O00206 839 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 CBX4O00257 560 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ADCY5O95622 1261 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ITGAVP06756 1048 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 MAT2AP31153 395 aaKnown RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 KRT9P35527 623 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 MTIF2P46199 727 aaKnown RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 OXCT1P55809 520 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 NXPH1P58417 271 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 UBE2HP62256 183 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 CNTN1Q12860 1018 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ZNF177Q13360 481 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 DLG2Q15700 870 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 SMAD1Q15797 465 aaKnown RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 INAVAQ3KP66 663 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 POM121L1PQ3SYA9 428 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 C5orf22Q49AR2 442 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 DPY19L2P1Q6NXN4 242 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 DHRS13Q6UX07 377 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 Q6ZVU0 165 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 GALNT15Q8N3T1 639 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ZNF397Q8NF99 534 aaPredicted RBP12.55□□□□□ -0.4
SNHG4-208ENST00000514110 OR8D1Q8WZ84 308 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 GDF3Q9NR23 364 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 PIGVQ9NUD9 493 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 VPS28Q9UK41 221 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 PPM1HQ9ULR3 514 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 TBC1D30Q9Y2I9 924 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 RAXQ9Y2V3 346 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 CABIN1Q9Y6J0 2220 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
SNHG4-208ENST00000514110 FAM170AA1A519 330 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 TRABD2BA6NFA1 517 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 ENC1O14682 589 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 MCF2LO15068 1137 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 CLDN11O75508 207 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 CNTN5O94779 1100 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 MT-CO1P00395 513 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 EPHA8P29322 1005 aaPredicted RBP12.54□□□□□ -0.4
SNHG4-208ENST00000514110 CDH4P55283 916 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 CLDN6P56747 220 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 BNIP3Q12983 259 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 MAN2A1Q16706 1144 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 ALFQ53S48 1182 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 AGBL4Q5VU57 503 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 NAPEPLDQ6IQ20 393 aa12.54□□□□□ -0.4
SNHG4-208ENST00000514110 DSG4Q86SJ6 1040 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms