RNA–Protein interactions for RNA: ENST00000513452.5

CLDND1-227, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-227ENST00000513452 DMAC2Q9NW81 257 aa10.84□□□□□ -0.67
CLDND1-227ENST00000513452 DNAJC28Q9NX36 388 aa10.84□□□□□ -0.67
CLDND1-227ENST00000513452 SEPT3Q9UH03 358 aa10.84□□□□□ -0.67
CLDND1-227ENST00000513452 SARDHQ9UL12 918 aa10.84□□□□□ -0.67
CLDND1-227ENST00000513452 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.84□□□□□ -0.67
CLDND1-227ENST00000513452 SPTAN1Q13813 2472 aaKnown RBP10.84□□□□□ -0.67
CLDND1-227ENST00000513452 NOTCH2Q04721 2471 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 IKBKBO14920 756 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 XPO1O14980 1071 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 RNGTTO60942 597 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 LUC7L3O95232 432 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 GJB6O95452 261 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 NR3C1P04150 777 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 ITGA2BP08514 1039 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 TRIM49P0CI25 452 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 TRIM49CP0CI26 452 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 GCLMP48507 274 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 RAD23BP54727 409 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 SRSF6Q13247 344 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 SLC39A14Q15043 492 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 CEP135Q66GS9 1140 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 ARHGAP17Q68EM7 881 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 ZCCHC8Q6NZY4 707 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 MSANTD2Q6P1R3 559 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 DSG4Q86SJ6 1040 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 SLC9A9Q8IVB4 645 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 SLC22A18ASQ8N1D0 253 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 CCDC150Q8NCX0 1101 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 WDR36Q8NI36 951 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 OR8D1Q8WZ84 308 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 NOX5Q96PH1 765 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 NUCKS1Q9H1E3 243 aaKnown RBP10.83□□□□□ -0.68
CLDND1-227ENST00000513452 MMRN2Q9H8L6 949 aa10.83□□□□□ -0.68
CLDND1-227ENST00000513452 CCDC187A0A096LP49 1063 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 A0A1W2PQU0 124 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 CASC3O15234 703 aaKnown RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 PPFIA2O75334 1257 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 SFTPCP11686 197 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 CR2P20023 1033 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 AKT2P31751 481 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 NNMTP40261 264 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 MLLT3P42568 568 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 VAMP7P51809 220 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 PDX1P52945 283 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 TBX4P57082 545 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 CLDN2P57739 230 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 TAS2R38P59533 333 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 DRAP1Q14919 205 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 TGIF1Q15583 401 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 DCAF6Q58WW2 860 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 FAM46CQ5VWP2 391 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 OR6B2Q6IFH4 312 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 PTAR1Q7Z6K3 402 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 JAMLQ86YT9 394 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 IQUBQ8NA54 791 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 ZNF548Q8NEK5 533 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 USP28Q96RU2 1077 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 DDX50Q9BQ39 737 aaKnown RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 SYNDIG1Q9H7V2 258 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 PREBQ9HCU5 417 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 CISHQ9NSE2 258 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 TSPAN16Q9UKR8 245 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 FRMD4BQ9Y2L6 1034 aa10.82□□□□□ -0.68
CLDND1-227ENST00000513452 MORC2Q9Y6X9 1032 aaPredicted RBP10.82□□□□□ -0.68
CLDND1-227ENST00000513452 C1QTNF3-AMACRE9PGA6 284 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 MUSKO15146 869 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 TCEA3O75764 348 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 MOCS2O96007 188 aaPredicted RBP10.81□□□□□ -0.68
CLDND1-227ENST00000513452 LCP1P13796 627 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 SLC5A2P31639 672 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 INHBCP55103 352 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 DAOAP59103 153 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 HNRNPKP61978 463 aaKnown RBP eCLIP10.81□□□□□ -0.68
CLDND1-227ENST00000513452 PPP3CAQ08209 521 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 BST2Q10589 180 aaKnown RBP10.81□□□□□ -0.68
CLDND1-227ENST00000513452 ZNF284Q2VY69 593 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 DEFB133Q30KQ1 61 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 C4orf17Q53FE4 359 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 MS4A13Q5J8X5 152 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 PERM1Q5SV97 790 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 GCNT7Q6ZNI0 430 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 LGI2Q8N0V4 545 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 TPCN2Q8NHX9 752 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 FRS2Q8WU20 508 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 IFT43Q96FT9 208 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 SEMA3CQ99985 751 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 NCKIPSDQ9NZQ3 722 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 HESX1Q9UBX0 185 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 PAXBP1Q9Y5B6 917 aa10.81□□□□□ -0.68
CLDND1-227ENST00000513452 USP9YO00507 2555 aaPredicted RBP10.81□□□□□ -0.68
CLDND1-227ENST00000513452 DOCK9Q9BZ29 2069 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 PVALEFA0A1B0GWK0 134 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 A6NNZ2 444 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 H3BM21 787 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 PIK3R2O00459 728 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 PLD2O14939 933 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 BNIP3LO60238 219 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 NOBOXO60393 691 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 PDGFRAP16234 1089 aa10.8□□□□□ -0.68
CLDND1-227ENST00000513452 ZNF18P17022 549 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms