RNA–Protein interactions for RNA: ENST00000513433.1

SNX25-206, Transcript of sorting nexin 25, humanhuman

TSL 3

Gene SNX25, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-206ENST00000513433 SRSF7Q16629 238 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNX25-206ENST00000513433 Q4G0T1 1027 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 KHDC1Q4VXA5 237 aaKnown RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 SLC44A4Q53GD3 710 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 EARS2Q5JPH6 523 aaKnown RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 PLAC9Q5JTB6 97 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 TAF2Q6P1X5 1199 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 ZNF782Q6ZMW2 699 aaPredicted RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 PIK3AP1Q6ZUJ8 805 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 ZNF551Q7Z340 670 aaPredicted RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 NEK8Q86SG6 692 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 TRPV1Q8NER1 839 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 MAFAQ8NHW3 353 aaPredicted RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 FKBP10Q96AY3 582 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 MBOAT7Q96N66 472 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 GUCD1Q96NT3 240 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 NAP1L4Q99733 375 aaKnown RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 CNPPD1Q9BV87 410 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 KRTAP1-5Q9BYS1 174 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 SLC13A1Q9BZW2 595 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.28□□□□□ -1.56
SNX25-206ENST00000513433 BRD9Q9H8M2 597 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 DDX20Q9UHI6 824 aaKnown RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 ZHX1Q9UKY1 873 aaPredicted RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 MTMR6Q9Y217 621 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 UBIAD1Q9Y5Z9 338 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 DDX49Q9Y6V7 483 aaKnown RBP5.28□□□□□ -1.56
SNX25-206ENST00000513433 LOXHD1Q8IVV2 1947 aa5.28□□□□□ -1.56
SNX25-206ENST00000513433 NFASCO94856 1347 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 LAMA2P24043 3122 aaKnown RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 VPS37CA5D8V6 355 aaPredicted RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 F5H697 171 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 EDIL3O43854 480 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 DUSP11O75319 330 aaKnown RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 ARIH2O95376 493 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 TDP2O95551 362 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 GJB1P08034 283 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 RARBP10826 455 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 CCL5P13501 91 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 JUPP14923 745 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 CAPN2P17655 700 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 UBA1P22314 1058 aaKnown RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 CST5P28325 142 aaPredicted RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 CCND3P30281 292 aaPredicted RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 ACAP2Q15057 778 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 LRIT3Q3SXY7 679 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 DUSP28Q4G0W2 176 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 RILPL1Q5EBL4 403 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 TLK2Q86UE8 772 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 ZNF366Q8N895 744 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 PSD4Q8NDX1 1056 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 ETNPPLQ8TBG4 499 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 SENP7Q9BQF6 1050 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 MXRA8Q9BRK3 442 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 SIK2Q9H0K1 926 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 UPF3AQ9H1J1 476 aaKnown RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 SMOC2Q9H3U7 446 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 ZSCAN16Q9H4T2 348 aaPredicted RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 KCNMB3Q9NPA1 279 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 NOL7Q9UMY1 257 aaKnown RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 Q9Y3F1 56 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 MYH9P35579 1960 aaKnown RBP5.27□□□□□ -1.57
SNX25-206ENST00000513433 ARID2Q68CP9 1835 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 TCHHQ07283 1943 aa5.27□□□□□ -1.57
SNX25-206ENST00000513433 SYNRGQ9UMZ2 1314 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 IPO5O00410 1097 aaKnown RBP5.26□□□□□ -1.57
SNX25-206ENST00000513433 LAD1O00515 517 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 TBX3O15119 743 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 TP73O15350 636 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 SLC37A4O43826 429 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 NEMFO60524 1076 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 CCNT1O60563 726 aaKnown RBP5.26□□□□□ -1.57
SNX25-206ENST00000513433 JTBO76095 146 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 NXPH3O95157 252 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 MT-CO1P00395 513 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 GH1P01241 217 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 HNRNPCP07910 306 aaKnown RBP eCLIP5.26□□□□□ -1.57
SNX25-206ENST00000513433 NR2F6P10588 404 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 TXNP10599 105 aaKnown RBP5.26□□□□□ -1.57
SNX25-206ENST00000513433 TNFAIP2Q03169 654 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 ARHGAP1Q07960 439 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 PKP1Q13835 747 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 NEDD9Q14511 834 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 LETM2Q2VYF4 491 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 MTX3Q5HYI7 312 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 PRAMEF19Q5SWL8 479 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 CELF3Q5SZQ8 465 aaKnown RBP5.26□□□□□ -1.57
SNX25-206ENST00000513433 ANKRD16Q6P6B7 361 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 METTL7BQ6UX53 244 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 SEPT14Q6ZU15 432 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 DTX2Q86UW9 622 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 PLA2G4DQ86XP0 818 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 PPTC7Q8NI37 304 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 CYP2W1Q8TAV3 490 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 FAM136AQ96C01 138 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 NELL2Q99435 816 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 RIT2Q99578 217 aa5.26□□□□□ -1.57
SNX25-206ENST00000513433 VRK1Q99986 396 aaPredicted RBP5.26□□□□□ -1.57
SNX25-206ENST00000513433 ACTRT3Q9BYD9 372 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms