RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 PDZK1P1A8MUH7 402 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 HDAC3O15379 428 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 FKBP9O95302 570 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 CAPN1P07384 714 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 OAZ1P54368 228 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 GTF2H3Q13889 308 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 FASTKD3Q14CZ7 662 aaKnown RBP11.45□□□□□ -0.58
TCOF1-211ENST00000513346 NPY5RQ15761 445 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 C11orf91Q3C1V1 193 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 FKBP9P1Q75LS8 142 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 PABPC5Q96DU9 382 aaKnown RBP11.45□□□□□ -0.58
TCOF1-211ENST00000513346 CHST12Q9NRB3 414 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 POMPQ9Y244 141 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 ABCC6O95255 1503 aa11.45□□□□□ -0.58
TCOF1-211ENST00000513346 PSMD12O00232 456 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 GNAZP19086 355 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 HLA-DPA1P20036 260 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 LRPAP1P30533 357 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 IL12RB1P42701 662 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 UBE3AQ05086 875 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 FAM98BQ52LJ0 330 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ARSHQ5FYA8 562 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 PALB2Q86YC2 1186 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 SCAIQ8N9R8 606 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 COLGALT1Q8NBJ5 622 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 RXFP2Q8WXD0 754 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 UBE2OQ9C0C9 1292 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 PNPOQ9NVS9 261 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 NDUFAF1Q9Y375 327 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 RBMX2Q9Y388 322 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TPRKBQ9Y3C4 175 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 A0A087WZ62 844 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 SIN3BO75182 1162 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 RBP1P09455 135 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ABL2P42684 1182 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TRAF3Q13114 568 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 NUDT18Q6ZVK8 323 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 BBS12Q6ZW61 710 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 C8orf59Q8N0T1 100 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 USP33Q8TEY7 942 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 RNF145Q96MT1 663 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 FDXACB1Q9BRP7 624 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 CHID1Q9BWS9 393 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 PPM1HQ9ULR3 514 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ARIH1Q9Y4X5 557 aaPredicted RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 SEC24AO95486 1093 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 LSAMPQ13449 338 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 LY6KQ17RY6 165 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TTC23LQ6PF05 361 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 YAF2Q8IY57 180 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 BANPQ8N9N5 519 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 POC5Q8NA72 575 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TMEM169Q96HH4 297 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TBCCD1Q9NVR7 557 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 FAM8A1Q9UBU6 413 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 SYNPO2Q9UMS6 1093 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TMEM114B3SHH9 223 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 MSCO60682 206 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 MT-CO1P00395 513 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 NCAM1P13591 858 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 INSRRP14616 1297 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 MGAT1P26572 445 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 PTPN7P35236 360 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ALDH7A1P49419 539 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ST13P50502 369 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 CSTF3Q12996 717 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 MAPRE1Q15691 268 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 AMHR2Q16671 573 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 SPANXN2Q5MJ10 180 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 TTC23Q5W5X9 447 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ASRGL1Q7L266 308 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 ATPAF2Q8N5M1 289 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 PTCD3Q96EY7 689 aaKnown RBP11.44□□□□□ -0.58
TCOF1-211ENST00000513346 CXorf21Q9HAI6 301 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 SPAG4Q9NPE6 437 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 DYRK4Q9NR20 520 aa11.44□□□□□ -0.58
TCOF1-211ENST00000513346 STAG3L1P0CL83 205 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 RBL1P28749 1068 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 MSX2P35548 267 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 RALGPS1Q5JS13 557 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 SPANXN3Q5MJ09 141 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 DCAF12L1Q5VU92 463 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 BNIPLQ7Z465 357 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 DPF3Q92784 378 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 ABI2Q9NYB9 513 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 CLUHO75153 1309 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 LZTS3O60299 673 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 MTA2O94776 668 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 VAPBO95292 243 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 CNTN2Q02246 1040 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 TOP3AQ13472 1001 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 FRG1Q14331 258 aaKnown RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 SYTL1Q8IYJ3 562 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 SEC14L1Q92503 715 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 HSPBAP1Q96EW2 488 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 HMX1Q9NP08 348 aaPredicted RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 ABCB10Q9NRK6 738 aa11.43□□□□□ -0.58
TCOF1-211ENST00000513346 OLA1Q9NTK5 396 aaKnown RBP11.43□□□□□ -0.58
TCOF1-211ENST00000513346 COMMD8Q9NX08 183 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms