RNA–Protein interactions for RNA: ENST00000513243.5

DDR1-272, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 5

Gene DDR1, Length 549 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-272ENST00000513243 TMEM74BQ9NUR3 256 aa18.22■□□□□ 0.51
DDR1-272ENST00000513243 CNOT8Q9UFF9 292 aaKnown RBP18.22■□□□□ 0.51
DDR1-272ENST00000513243 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.22■□□□□ 0.51
DDR1-272ENST00000513243 A0A0D9SEW6 157 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 EDDM13A0A1B0GTR0 161 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 TMEM191CA6NGB0 347 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 PRR5-ARHGAP8B1AHC4 643 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 GDF9O60383 454 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 FOXD2O60548 495 aaPredicted RBP18.21■□□□□ 0.51
DDR1-272ENST00000513243 VAV1P15498 845 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 ITPKAP23677 461 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 OXTRP30559 389 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 NNMTP40261 264 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 VASPP50552 380 aaPredicted RBP18.21■□□□□ 0.51
DDR1-272ENST00000513243 ARHGAP8P85298 464 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 ZNF33AQ06730 810 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 SCAPQ12770 1279 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 RSPO4Q2I0M5 234 aaPredicted RBP18.21■□□□□ 0.51
DDR1-272ENST00000513243 C6orf118Q5T5N4 469 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 ZNF776Q68DI1 518 aaPredicted RBP18.21■□□□□ 0.51
DDR1-272ENST00000513243 SPECC1LQ69YQ0 1117 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 TMC6Q7Z403 805 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 FRS2Q8WU20 508 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 PTPRN2Q92932 1015 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 ZNF653Q96CK0 615 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 ZNF419Q96HQ0 510 aaPredicted RBP18.21■□□□□ 0.51
DDR1-272ENST00000513243 FAM129BQ96TA1 746 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.21■□□□□ 0.51
DDR1-272ENST00000513243 TRIM7Q9C029 511 aa18.21■□□□□ 0.51
DDR1-272ENST00000513243 A0A087X0T9 212 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.2■□□□□ 0.5
DDR1-272ENST00000513243 ILVBLA1L0T0 632 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 PATE3B3GLJ2 98 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 ATP9BO43861 1147 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 SNAP91O60641 907 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 LRIG2O94898 1065 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 FAM228BP0C875 321 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 ID4P47928 161 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 ZBTB16Q05516 673 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 ZNF252P-AS1Q0IIN9 211 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 RWDD4Q6NW29 188 aaKnown RBP18.2■□□□□ 0.5
DDR1-272ENST00000513243 FAM124AQ86V42 546 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 SYT12Q8IV01 421 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 DRC7Q8IY82 874 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 PYROXD2Q8N2H3 581 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 STK40Q8N2I9 435 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 C12orf50Q8NA57 414 aaPredicted RBP18.2■□□□□ 0.5
DDR1-272ENST00000513243 OR7D4Q8NG98 312 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 HSPA12BQ96MM6 686 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 C2orf49Q9BVC5 232 aaPredicted RBP18.2■□□□□ 0.5
DDR1-272ENST00000513243 GPR174Q9BXC1 333 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 ARHGAP20Q9P2F6 1191 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 VPS51Q9UID3 782 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 SLC25A13Q9UJS0 675 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 PILRBQ9UKJ0 227 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 FZD10Q9ULW2 581 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 NEU3Q9UQ49 428 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 NUP205Q92621 2012 aa18.2■□□□□ 0.5
DDR1-272ENST00000513243 DMXL1Q9Y485 3027 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 MT-CO1P00395 513 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 DNTTP04053 509 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 MYBL1P10243 752 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 PSMA2P25787 234 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 HNRNPH3P31942 346 aaKnown RBP18.19■□□□□ 0.5
DDR1-272ENST00000513243 L1CAMP32004 1257 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 KRT83P78385 493 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 AASDHQ4L235 1098 aaPredicted RBP18.19■□□□□ 0.5
DDR1-272ENST00000513243 EFHC2Q5JST6 749 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 ZNF783Q6ZMS7 281 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 VPS36Q86VN1 386 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 NLRP14Q86W24 1093 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 MMAAQ8IVH4 418 aaKnown RBP18.19■□□□□ 0.5
DDR1-272ENST00000513243 VSTM4Q8IW00 320 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 SH2D3CQ8N5H7 860 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 ARFGAP1Q8N6T3 406 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 DCAF4L2Q8NA75 395 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 TRIM11Q96F44 468 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 NDFIP2Q9NV92 336 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 DLL3Q9NYJ7 618 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 MYO1AQ9UBC5 1043 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 HS3ST2Q9Y278 367 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 ATXN2Q99700 1313 aaKnown RBP18.19■□□□□ 0.5
DDR1-272ENST00000513243 DOCK4Q8N1I0 1966 aa18.19■□□□□ 0.5
DDR1-272ENST00000513243 KHNYNO15037 678 aaKnown RBP18.18■□□□□ 0.5
DDR1-272ENST00000513243 RNASEH1O60930 286 aaKnown RBP18.18■□□□□ 0.5
DDR1-272ENST00000513243 RHOQP17081 205 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 DESP17661 470 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 GLDCP23378 1020 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 ACSL1P33121 698 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 GNA12Q03113 381 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 DLG2Q15700 870 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 CST6Q15828 149 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 ACCSLQ4AC99 568 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 PEAR1Q5VY43 1037 aaPredicted RBP18.18■□□□□ 0.5
DDR1-272ENST00000513243 CADM4Q8NFZ8 388 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 FNIP1Q8TF40 1166 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 FOXJ1Q92949 421 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 TBC1D31Q96DN5 1066 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 SPON2Q9BUD6 331 aa18.18■□□□□ 0.5
DDR1-272ENST00000513243 PABPC3Q9H361 631 aaKnown RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms