RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SLC5A1P13866 664 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 MX2P20592 715 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 GSTM2P28161 218 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 CENPAP49450 140 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 MCCD1P59942 119 aaPredicted RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 POLR2GP62487 172 aaKnown RBP eCLIP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 TARDBPQ13148 414 aaKnown RBP eCLIP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 SLC13A2Q13183 592 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 NEDD8Q15843 81 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 CCDC142Q17RM4 750 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 KNOP1Q1ED39 458 aaKnown RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 EPC2Q52LR7 807 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 SH3BP5LQ7L8J4 393 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 GALNT12Q8IXK2 581 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 CLYBLQ8N0X4 340 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 ZCCHC7Q8N3Z6 543 aaKnown RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 BHLHE22Q8NFJ8 381 aaPredicted RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 OR13F1Q8NGS4 319 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 CABLES1Q8TDN4 633 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 SLC10A4Q96EP9 437 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 SERPINI1Q99574 410 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 DPEP3Q9H4B8 488 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 IFT22Q9H7X7 185 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 DIABLOQ9NR28 239 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 CHST12Q9NRB3 414 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 DDX28Q9NUL7 540 aaKnown RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 KLHL11Q9NVR0 708 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 TNFRSF10DQ9UBN6 386 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 TRMT112Q9UI30 125 aaKnown RBP7.46□□□□□ -1.21
CPNE4-208ENST00000511604 BOLA1Q9Y3E2 137 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 PCDHAC2Q9Y5I4 1007 aa7.46□□□□□ -1.21
CPNE4-208ENST00000511604 CLUHO75153 1309 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 LRRIQ4A6NIV6 560 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 FAM25AB3EWG3 89 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 FAM25CB3EWG5 89 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 FAM25GB3EWG6 89 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 NOP56O00567 594 aaKnown RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 AKAP10O43572 662 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 MTA2O94776 668 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 KCNK2O95069 426 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TOP3BO95985 862 aaKnown RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 HOXB1P14653 301 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 XRCC1P18887 633 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 GRIK1P39086 918 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 HTR2BP41595 481 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 CLK1P49759 484 aaKnown RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 ETV1P50549 477 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 FAAP100Q0VG06 881 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 BFSP2Q13515 415 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 GRM4Q14833 912 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TCEAL1Q15170 157 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TAF12Q16514 161 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 C5orf22Q49AR2 442 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 AASDHQ4L235 1098 aaPredicted RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 ATP13A4Q4VNC1 1196 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 CEP55Q53EZ4 464 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TEX44Q53QW1 395 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 FSCBQ5H9T9 825 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 NHSL2Q5HYW2 709 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 CCNJQ5T5M9 372 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 FAM171BQ6P995 826 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 DCUN1D2Q6PH85 259 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 PRR23BQ6ZRT6 265 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 PARP8Q8N3A8 854 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 SNX31Q8N9S9 440 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 ETNPPLQ8TBG4 499 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 ZFP90Q8TF47 636 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TFAP2CQ92754 450 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 E2F7Q96AV8 911 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 ZFYVE19Q96K21 471 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TBCBQ99426 244 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 DHRS4Q9BTZ2 278 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 GON7Q9BXV9 100 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 SEMA6AQ9H2E6 1030 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 TOR4AQ9NXH8 423 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 CPSF3Q9UKF6 684 aaKnown RBP7.46□□□□□ -1.22
CPNE4-208ENST00000511604 HCN4Q9Y3Q4 1203 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 RIPK3Q9Y572 518 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 CAMTA1Q9Y6Y1 1673 aa7.46□□□□□ -1.22
CPNE4-208ENST00000511604 PABPN1LA6NDY0 278 aaKnown RBP7.45□□□□□ -1.22
CPNE4-208ENST00000511604 TISP43B9A030 160 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 ZBTB39O15060 712 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 FAM155BO75949 473 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 PGK2P07205 417 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 GNAO1P09471 354 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 FDX1P10109 184 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 RALAP11233 206 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 BMP3P12645 472 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 BTF3P20290 206 aaKnown RBP7.45□□□□□ -1.22
CPNE4-208ENST00000511604 KLRK1P26718 216 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 PIK3R1P27986 724 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 L1CAMP32004 1257 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 GJC1P36383 396 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 GPC5P78333 572 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 ZNF33BQ06732 778 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 ATAD3CQ5T2N8 411 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 C16orf46Q6P387 395 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 ZCCHC23Q6ZST2 131 aa7.45□□□□□ -1.22
CPNE4-208ENST00000511604 KRT25Q7Z3Z0 450 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms