RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 IMPAD1Q9NX62 359 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 RAPGEFL1Q9UHV5 662 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 SCML1Q9UN30 329 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PLAAQ9Y263 795 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 SIN3BO75182 1162 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 ARHGEF15O94989 841 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CATP04040 527 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 NUDT17P0C025 328 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 ITIH1P19827 911 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 GCLMP48507 274 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PSMD4P55036 377 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CYP27A1Q02318 531 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 UBE3AQ05086 875 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 MARC1Q5VT66 337 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 FAM45BPQ6NSW5 357 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CCDC60Q8IWA6 550 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 SPICE1Q8N0Z3 855 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 STAG3L4Q8TBR4 150 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 GANCQ8TET4 914 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 MAML1Q92585 1016 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 SLCO2A1Q92959 643 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 HINFPQ9BQA5 517 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 KCTD10Q9H3F6 313 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 RUBCNLQ9H714 662 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 COPS7BQ9H9Q2 264 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PDE11AQ9HCR9 933 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 AGAP1Q9UPQ3 857 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CFL2Q9Y281 166 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PCDHA2Q9Y5H9 948 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PTPRZ1P23471 2315 aaPredicted RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 KMT2EQ8IZD2 1858 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 DOCK9Q9BZ29 2069 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 TOR1BO14657 336 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 ENC1O14682 589 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 DDX3YO15523 660 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CLDN11O75508 207 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 TSPAN9O75954 239 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 WARSP23381 471 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 MDH1P40925 334 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 ZNF132P52740 706 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PGM5Q15124 567 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 FSCN1Q16658 493 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 GSTA3Q16772 222 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 PARP6Q2NL67 630 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 DUSP28Q4G0W2 176 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 TTC27Q6P3X3 843 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CPNE9Q8IYJ1 553 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 CPA6Q8N4T0 437 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 BHMTQ93088 406 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 TOP1MTQ969P6 601 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 RMDN2Q96LZ7 410 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 NECTIN4Q96NY8 510 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 TDRD3Q9H7E2 651 aaKnown RBP5.03□□□□□ -1.6
PTPN13-209ENST00000511467 GGA3Q9NZ52 723 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 TPRKBQ9Y3C4 175 aa5.03□□□□□ -1.6
PTPN13-209ENST00000511467 FER1L5A0AVI2 2057 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TCRBV5S4A2TA0A5A2 114 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 CCDC162PA2VCL2 907 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 VSTM5A8MXK1 200 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 FAM220BPB1ANY3 271 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 MATN2O00339 956 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 FKTNO75072 461 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 IGHEP01854 428 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 SARSP49591 514 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 NDST2P52849 883 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 HMGCS2P54868 508 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 SLC12A3P55017 1021 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 PPIDQ08752 370 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 CELF3Q5SZQ8 465 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 ANGEL2Q5VTE6 544 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TSHZ1Q6ZSZ6 1077 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TRPM8Q7Z2W7 1104 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 ZNF572Q7Z3I7 529 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 RBFAQ8N0V3 343 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 GDAP1Q8TB36 358 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 PELOQ9BRX2 385 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 SLC25A23Q9BV35 468 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 EPB41L4BQ9H329 900 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 RAB6BQ9NRW1 208 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 INTS13Q9NVM9 706 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TMED5Q9Y3A6 229 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 CYP2D7A0A087X1C5 515 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 GOLGA8SH3BPF8 625 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 PROM1O43490 865 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 RBP3P10745 1247 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TARSP26639 723 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 YWHAQP27348 245 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 AP1S1P61966 158 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 MRPS6P82932 125 aaKnown RBP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 CHRNB3Q05901 458 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 LAMTOR4Q0VGL1 99 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 IL18R1Q13478 541 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 TEAD4Q15561 434 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 VGLL2Q8N8G2 317 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 PIK3C3Q8NEB9 887 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 FAM45AQ8TCE6 357 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 UPF1Q92900 1129 aaKnown RBP eCLIP5.02□□□□□ -1.61
PTPN13-209ENST00000511467 NSL1Q96IY1 281 aa5.02□□□□□ -1.61
PTPN13-209ENST00000511467 RIPOR3Q96MK2 946 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms