RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 KIAA1958Q8N8K9 716 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 ZSCAN18Q8TBC5 510 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-209ENST00000511426 PGM2Q96G03 612 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 CELF6Q96J87 481 aaKnown RBP15.56■□□□□ 0.08
SCLT1-209ENST00000511426 CDCA3Q99618 268 aaPredicted RBP15.56■□□□□ 0.08
SCLT1-209ENST00000511426 NAT9Q9BTE0 207 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 ATXN3LQ9H3M9 355 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 TMBIM4Q9HC24 238 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 SEPT10Q9P0V9 454 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 RSPH14Q9UHP6 348 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 MSRAQ9UJ68 235 aa15.56■□□□□ 0.08
SCLT1-209ENST00000511426 AGO1Q9UL18 857 aaKnown RBP15.56■□□□□ 0.08
SCLT1-209ENST00000511426 AAR2Q9Y312 384 aaKnown RBP15.56■□□□□ 0.08
SCLT1-209ENST00000511426 TCRBV7S3A2A0A539 114 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 RASA4BC9J798 803 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 H3BQF6 201 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 ZNF197O14709 1029 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 RASA4O43374 803 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 RNF40O75150 1001 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 AP2A1O95782 977 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 KLKB1P03952 638 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 CKMP06732 381 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 ATP5DP30049 168 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 LMAN1P49257 510 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 PAPOLAP51003 745 aaKnown RBP15.55■□□□□ 0.08
SCLT1-209ENST00000511426 IL10RBQ08334 325 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 POLD3Q15054 466 aaPredicted RBP15.55■□□□□ 0.08
SCLT1-209ENST00000511426 LRRC8BQ6P9F7 803 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 HTR3DQ70Z44 454 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 TP53INP2Q8IXH6 220 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 CPXM2Q8N436 756 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 FCRL5Q96RD9 977 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 NOL6Q9H6R4 1146 aaKnown RBP15.55■□□□□ 0.08
SCLT1-209ENST00000511426 TRPC7Q9HCX4 862 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 ARHGAP26Q9UNA1 814 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 TEX264Q9Y6I9 313 aa15.55■□□□□ 0.08
SCLT1-209ENST00000511426 ILVBLA1L0T0 632 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 ANXA9O76027 345 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 ACSL3O95573 720 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 KYNUQ16719 465 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 KRT71Q3SY84 523 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 MPP7Q5T2T1 576 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TFAP2DQ7Z6R9 452 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 LINC00523Q86TU6 105 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 ARL14EPQ8N8R7 260 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-209ENST00000511426 HJURPQ8NCD3 748 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-209ENST00000511426 ATP6V1G3Q96LB4 118 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 GDF15Q99988 308 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 CORO1BQ9BR76 489 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 LRRC40Q9H9A6 602 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 SP110Q9HB58 689 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 NDFIP2Q9NV92 336 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TBC1D30Q9Y2I9 924 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 CPQQ9Y646 472 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 GOLGA8MH3BSY2 632 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 GFRA2O00451 464 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 NEBLO76041 1014 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 CNTN5O94779 1100 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 MYOGP15173 224 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TCF3P15923 654 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 PSMB4P28070 264 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 SLC6A4P31645 630 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 IRS1P35568 1242 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 OXCT1P55809 520 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 ZBTB17Q13105 803 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 SERINC3Q13530 473 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 RFTN1Q14699 578 aaPredicted RBP15.54■□□□□ 0.08
SCLT1-209ENST00000511426 FNBP1LQ5T0N5 605 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TXNDC8Q6A555 127 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 NAPEPLDQ6IQ20 393 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TDRPQ86YL5 185 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 CCDC33Q8N5R6 958 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TEX26Q8N6G2 289 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 PPP2R3CQ969Q6 453 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 C9orf72Q96LT7 481 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 PRKD2Q9BZL6 878 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 TASP1Q9H6P5 420 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 LRRC4CQ9HCJ2 640 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 GKN1Q9NS71 199 aa15.54■□□□□ 0.08
SCLT1-209ENST00000511426 ANAPC1Q9H1A4 1944 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 MTCL1Q9Y4B5 1905 aaKnown RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 CXorf51AA0A1B0GTR3 108 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 GRXCR1A8MXD5 290 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 RASGRF2O14827 1237 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 CCL16O15467 120 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 ZBTB24O43167 697 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 GREM1O60565 184 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 OBSL1O75147 1896 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 CDH16O75309 829 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 ARHGEF15O94989 841 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 JCHAINP01591 159 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 MYL4P12829 197 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 MMP13P45452 471 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 ZNF177Q13360 481 aaPredicted RBP15.53■□□□□ 0.08
SCLT1-209ENST00000511426 KLHL38Q2WGJ6 581 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 BBS9Q3SYG4 887 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 KCTD11Q693B1 232 aa15.53■□□□□ 0.08
SCLT1-209ENST00000511426 CYS1Q717R9 158 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms