RNA–Protein interactions for RNA: ENST00000511009.1

MBD4-209, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

TSL 2

Gene MBD4, Length 530 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-209ENST00000511009 ADH4P08319 380 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 HOXD12P35452 270 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 KRT20P35900 424 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 CPA2P48052 419 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 DGCR2P98153 550 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 EFNB1P98172 346 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 IL13RA2Q14627 380 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 WTAPQ15007 396 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 CC2D1BQ5T0F9 858 aaKnown RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 UBAP2Q5T6F2 1119 aaKnown RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 TMCO3Q6UWJ1 677 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 RPAP2Q8IXW5 612 aaPredicted RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 C16orf71Q8IYS4 520 aaPredicted RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 GHDCQ8N2G8 530 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 RAB40AQ8WXH6 277 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 TBC1D5Q92609 795 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 KLHL29Q96CT2 875 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 ZNF845Q96IR2 970 aaPredicted RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 HIC2Q96JB3 615 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 CCDC17Q96LX7 622 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 NR1H4Q96RI1 486 aaPredicted RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 ITPAQ9BY32 194 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 BRF2Q9HAW0 419 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 SMYD2Q9NRG4 433 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 PCDHB16Q9NRJ7 776 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 SEPT11Q9NVA2 429 aaKnown RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 ZDHHC7Q9NXF8 308 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 MPP6Q9NZW5 540 aa5.06□□□□□ -1.6
MBD4-209ENST00000511009 ADD3Q9UEY8 706 aaKnown RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 SIRT4Q9Y6E7 314 aaPredicted RBP5.06□□□□□ -1.6
MBD4-209ENST00000511009 KDM3AQ9Y4C1 1321 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 NPIPB15A6NHN6 443 aaPredicted RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 TNFSF14O43557 240 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 STARD3NLO95772 234 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 ENO1P06733 434 aaKnown RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 CHRM4P08173 479 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 LAMP2P13473 410 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 TGM2P21980 687 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 BSGP35613 385 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 RGS2P41220 211 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 EIF3BP55884 814 aaKnown RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 CYP4F2P78329 520 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 PFKFB3Q16875 520 aaPredicted RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 ANXA2RQ3ZCQ2 193 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 GJB7Q6PEY0 223 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 DHRS13Q6UX07 377 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 ENOSF1Q7L5Y1 443 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 RNF144BQ7Z419 303 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 BCDIN3DQ7Z5W3 292 aaKnown RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 SPRED1Q7Z699 444 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 LINC01465Q8N7H1 131 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 CREB3L4Q8TEY5 395 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 USP6NLQ92738 828 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 COQ10AQ96MF6 247 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 FYTTD1Q96QD9 318 aaKnown RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 CADM1Q9BY67 442 aaKnown RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 FTOQ9C0B1 505 aaKnown RBP eCLIP5.05□□□□□ -1.6
MBD4-209ENST00000511009 NUAK2Q9H093 628 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 SLC32A1Q9H598 525 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 ANKEF1Q9NU02 776 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 ARL15Q9NXU5 204 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 NKIRAS2Q9NYR9 191 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 LIMA1Q9UHB6 759 aaKnown RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 DHDHQ9UQ10 334 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 PKP3Q9Y446 797 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 LYVE1Q9Y5Y7 322 aa5.05□□□□□ -1.6
MBD4-209ENST00000511009 RSF1Q96T23 1441 aaPredicted RBP5.05□□□□□ -1.6
MBD4-209ENST00000511009 C16orf96A6NNT2 1141 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 MCIDASD6RGH6 385 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 CEP104O60308 925 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 TSPAN9O75954 239 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 SEC14L2O76054 403 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 CBX6O95503 412 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 ESRRBO95718 433 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 DRD4P21917 467 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 SFPQP23246 707 aaKnown RBP eCLIP5.04□□□□□ -1.6
MBD4-209ENST00000511009 MAPK4P31152 587 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 HOXD13P35453 343 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 ACTN2P35609 894 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 GJC1P36383 396 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 MTNR1AP48039 350 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 ADPRHP54922 357 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 RPL7AP62424 266 aaKnown RBP5.04□□□□□ -1.6
MBD4-209ENST00000511009 GOLGA8DPQ0D2H9 430 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 CHAF1BQ13112 559 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 LARS2Q15031 903 aaKnown RBP5.04□□□□□ -1.6
MBD4-209ENST00000511009 SLC18A3Q16572 532 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 LSM12Q3MHD2 195 aaKnown RBP5.04□□□□□ -1.6
MBD4-209ENST00000511009 SLC9B1Q4ZJI4 515 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 SLC30A9Q6PML9 568 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 TRIM72Q6ZMU5 477 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 IKBIPQ70UQ0 350 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 RASAL3Q86YV0 1011 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 DNAAF1Q8NEP3 725 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 C2CD4CQ8TF44 421 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 HSPH1Q92598 858 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 CELF1Q92879 486 aaKnown RBP5.04□□□□□ -1.6
MBD4-209ENST00000511009 SMARCE1Q969G3 411 aa5.04□□□□□ -1.6
MBD4-209ENST00000511009 NSUN4Q96CB9 384 aaKnown RBP5.04□□□□□ -1.6
MBD4-209ENST00000511009 KAZALD1Q96I82 304 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms