RNA–Protein interactions for RNA: ENST00000511002.5

SH3TC1-220, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 5

Gene SH3TC1, Length 1,124 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-220ENST00000511002 THAP10Q9P2Z0 257 aaPredicted RBP16■□□□□ 0.15
SH3TC1-220ENST00000511002 LCMT1Q9UIC8 334 aa16■□□□□ 0.15
SH3TC1-220ENST00000511002 NEU3Q9UQ49 428 aa16■□□□□ 0.15
SH3TC1-220ENST00000511002 DMXL1Q9Y485 3027 aa16■□□□□ 0.15
SH3TC1-220ENST00000511002 TNRC6BQ9UPQ9 1833 aaKnown RBP15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 MACROD2A1Z1Q3 448 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 SRGAP2O75044 1071 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 ALDH1A2O94788 518 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 CCDC175P0C221 793 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 NDUFV2P19404 249 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 GJC1P36383 396 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 AIF1P55008 147 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 ENPP2Q13822 863 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 SF3A2Q15428 464 aaKnown RBP15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 USP39Q53GS9 565 aaKnown RBP15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 RABGAP1LQ5R372 815 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 MANEALQ5VSG8 457 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 PMS2CLQ68D20 193 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 CHST9Q7L1S5 443 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 ADIPOR2Q86V24 386 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 PGBD3Q8N328 593 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 TXLNBQ8N3L3 684 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 SLC2A11Q9BYW1 496 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 IRX2Q9BZI1 471 aaPredicted RBP15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 DHX35Q9H5Z1 703 aaKnown RBP15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 OR12D3Q9UGF7 316 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 SPTBN4Q9H254 2564 aa15.99■□□□□ 0.15
SH3TC1-220ENST00000511002 CEP192Q8TEP8 1941 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 IGLV3-10A0A075B6K4 115 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 TYW5A2RUC4 315 aaKnown RBP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 CNTN5O94779 1100 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 LRIG2O94898 1065 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 MOCS3O95396 460 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 RARAP10276 462 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 PABPC1P11940 636 aaKnown RBP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 HLA-EP13747 358 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 COMTP21964 271 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 NRG1Q02297 640 aaPredicted RBP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 SEMA3BQ13214 749 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 FUT11Q495W5 492 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 C5orf22Q49AR2 442 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 ALFQ53S48 1182 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 MPP7Q5T2T1 576 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 ERMARDQ5T6L9 678 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 C11orf63Q6NUN7 778 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 LRRC31Q6UY01 552 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 KIAA0907Q7Z7F0 614 aaPredicted RBP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 ZNF366Q8N895 744 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 DDX51Q8N8A6 666 aaKnown RBP eCLIP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 HSPH1Q92598 858 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 KCTD15Q96SI1 283 aaPredicted RBP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 RXFP3Q9NSD7 469 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 KLHL11Q9NVR0 708 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 MPP6Q9NZW5 540 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 GGA2Q9UJY4 613 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 INTS6Q9UL03 887 aaKnown RBP15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 PPP2R2CQ9Y2T4 447 aa15.98■□□□□ 0.15
SH3TC1-220ENST00000511002 A0A1B0GVM2 712 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 GRID2IPA4D2P6 1211 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 TCAF2A6NFQ2 919 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 DRGXA6NNA5 263 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 CREB3O43889 395 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 GDF9O60383 454 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 LUC7L3O95232 432 aaKnown RBP15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 L1CAMP32004 1257 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 ID4P47928 161 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 NUMBP49757 651 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 NAP1L1P55209 391 aaKnown RBP15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 LMAN2Q12907 356 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 CSRP2Q16527 193 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 HADHQ16836 314 aaKnown RBP15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 FSCBQ5H9T9 825 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 ACBD5Q5T8D3 534 aaPredicted RBP15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 TTC39BQ5VTQ0 682 aaPredicted RBP15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 TCEAL6Q6IPX3 200 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 SDE2Q6IQ49 451 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 PRR23CQ6ZRP0 262 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 MFN1Q8IWA4 741 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 CCAR2Q8N163 923 aaKnown RBP15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 CARNMT1Q8N4J0 409 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 TEKT4Q8WW24 435 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 TCEAL3Q969E4 200 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 LOXL4Q96JB6 756 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 MRGPRX1Q96LB2 322 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 WDR87Q6ZQQ6 2873 aa15.97■□□□□ 0.15
SH3TC1-220ENST00000511002 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 SPOPO43791 374 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 TNNT1P13805 278 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 MPLP40238 635 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 SLC1A1P43005 524 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 CREB5Q02930 508 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 CDH18Q13634 790 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 EIF4HQ15056 248 aaKnown RBP15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 ELF2Q15723 593 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 PTPRNQ16849 979 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 RSPO4Q2I0M5 234 aaPredicted RBP15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 ATP13A4Q4VNC1 1196 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 BOLA3Q53S33 107 aa15.96■□□□□ 0.15
SH3TC1-220ENST00000511002 PPP6R3Q5H9R7 873 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms