RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 RPL10AP62906 217 aaKnown RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 RAPGEF1Q13905 1077 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 KCNC3Q14003 757 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 CNGA2Q16280 664 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 ARHGAP44Q17R89 818 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SLC39A12Q504Y0 691 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 LIN9Q5TKA1 542 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 PPP1R2P3Q6NXS1 205 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 ZC3H14Q6PJT7 736 aaKnown RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 TMEM270Q6UE05 265 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 PRSS55Q6UWB4 352 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 LCLAT1Q6UWP7 414 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SCARA5Q6ZMJ2 495 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 OSTM1Q86WC4 334 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SPATA2LQ8IUW3 424 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 DRC7Q8IY82 874 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 Q8N1Y9 231 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SLC4A11Q8NBS3 891 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 LEMD2Q8NC56 503 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 OR10T2Q8NGX3 314 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SLC22A17Q8WUG5 538 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 CHAC2Q8WUX2 184 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 AUTS2Q8WXX7 1259 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 ANP32BQ92688 251 aaKnown RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 CYFIP2Q96F07 1278 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SMARCD1Q96GM5 515 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SPATA17Q96L03 361 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 C8orf48Q96LL4 319 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 MAGEB10Q96LZ2 347 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 CDX2Q99626 313 aaPredicted RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 PKMYT1Q99640 499 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 HNRNPABQ99729 332 aaKnown RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 RTP3Q9BQQ7 232 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 JAM3Q9BX67 310 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 TTYH3Q9C0H2 523 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SDCBP2Q9H190 292 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 CAAP1Q9H8G2 361 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 SFXN1Q9H9B4 322 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 PNPLA8Q9NP80 782 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 PCDH12Q9NPG4 1184 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 COMMD8Q9NX08 183 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 MTMR10Q9NXD2 777 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 AIPL1Q9NZN9 384 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 HESX1Q9UBX0 185 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 GTF3C4Q9UKN8 822 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 LUC7L2Q9Y383 392 aaKnown RBP5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 CEP83Q9Y592 693 aa5.78□□□□□ -1.48
HMGB1P44-201ENST00000508597 MYBPHLA2RUH7 354 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 MTMR11A4FU01 709 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 DBX1A6NMT0 343 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 F8VZ95 297 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 WNT9AO14904 365 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 SEMA7AO75326 666 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 GFPT2O94808 682 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 RASGRP1O95267 797 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 FGF19O95750 216 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 CSH1P0DML2 217 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 CSH2P0DML3 217 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 HAPLN1P10915 354 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 KRT5P13647 590 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 CD19P15391 556 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 RPL17P18621 184 aaKnown RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 HNRNPH3P31942 346 aaKnown RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 PRKCIP41743 596 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ALDH1A3P47895 512 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 PPP3CCP48454 512 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 NRIP1P48552 1158 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 PDE6CP51160 858 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZNF75DP51815 510 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 BCAT1P54687 386 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 RPL11P62913 178 aaKnown RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ITIH3Q06033 890 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ADCY1Q08828 1119 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ADAM15Q13444 863 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 VEPH1Q14D04 833 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 TCEAL5Q5H9L2 206 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 MDH1BQ5I0G3 518 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 SFMBT2Q5VUG0 894 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 TRIM72Q6ZMU5 477 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ACOT1Q86TX2 421 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 MTDHQ86UE4 582 aaKnown RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ITIH5Q86UX2 942 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 VPS36Q86VN1 386 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 PALB2Q86YC2 1186 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 CNGA4Q8IV77 575 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ELMOD1Q8N336 334 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ANKRD52Q8NB46 1076 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 BHLHE22Q8NFJ8 381 aaPredicted RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 OR8K1Q8NGG5 319 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 ZNF606Q8WXB4 792 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 DDX1Q92499 740 aaKnown RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 KAT5Q92993 513 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 MYLPFQ96A32 169 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 PABPC5Q96DU9 382 aaKnown RBP5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 PCED1BQ96HM7 432 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 B3GALT6Q96L58 329 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 HSFY1Q96LI6 401 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 GUCD1Q96NT3 240 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 TWNKQ96RR1 684 aa5.77□□□□□ -1.49
HMGB1P44-201ENST00000508597 MED10Q9BTT4 135 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms