RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 OR2T34Q8NGX1 318 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 NT5C3BQ969T7 300 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 FAM131CQ96AQ9 280 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 SLC6A18Q96N87 628 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 SPAG5Q96R06 1193 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 OMDQ99983 421 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 NAA15Q9BXJ9 866 aaKnown RBP13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 NUP62CLQ9H1M0 184 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 ANLNQ9NQW6 1124 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 OR51B4Q9Y5P0 310 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 ACACAQ13085 2346 aa13.39□□□□□ -0.27
HMGCS1-205ENST00000508319 H0Y8X5 98 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 KCNK3O14649 394 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 VILLO15195 856 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 ATP9BO43861 1147 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 DKK1O94907 266 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 ADCY5O95622 1261 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 GOT1P17174 413 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 C5AR1P21730 350 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 DRD3P35462 400 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 NNMTP40261 264 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 GABRB2P47870 512 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 CCT8P50990 548 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 OXCT1P55809 520 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 SNX16P57768 344 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 BPIFB4P59827 614 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 PPP2CBP62714 309 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 PPP2CAP67775 309 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 KLHDC7AQ5VTJ3 777 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 SND1Q7KZF4 910 aaKnown RBP eCLIP13.38□□□□□ -0.272e-15■■■□□ 17.3
HMGCS1-205ENST00000508319 ADAT2Q7Z6V5 191 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 PGAP3Q96FM1 320 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 FEM1AQ9BSK4 669 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 SAMSN1Q9NSI8 373 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 ARHGEF38Q9NXL2 777 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 RRN3Q9NYV6 651 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 DACH1Q9UI36 760 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 APOBEC2Q9Y235 224 aaKnown RBP13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 TBC1D30Q9Y2I9 924 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 COL5A1P20908 1838 aaPredicted RBP13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 DOCK9Q9BZ29 2069 aa13.38□□□□□ -0.27
HMGCS1-205ENST00000508319 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 FAM170AA1A519 330 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 PCDHGA12O60330 932 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 CLDN11O75508 207 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 CNTN5O94779 1100 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 IL1BP01584 269 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 WNT1P04628 370 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 CAPNS1P04632 268 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 ATXN1LP0C7T5 689 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 UCHL3P15374 230 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 SCNN1AP37088 669 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 CXCR3P49682 368 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 SULT1E1P49888 294 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 CCR5P51681 352 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 ZNF177Q13360 481 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 TCP11X2Q5H9J9 407 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 BRMS1LQ5PSV4 323 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 ARTNQ5T4W7 220 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 FAM102AQ5T9C2 384 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 TAF3Q5VWG9 929 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 Q6ZVU0 165 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 NOP9Q86U38 636 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 XYLT1Q86Y38 959 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 ZNF683Q8IZ20 524 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 TMEM35BQ8NCS4 154 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 OR14C36Q8NHC7 312 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 EPS8L1Q8TE68 723 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 RHBDD1Q8TEB9 315 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 ACE2Q9BYF1 805 aaPredicted RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 TKTL2Q9H0I9 626 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 VPS28Q9UK41 221 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 SARDHQ9UL12 918 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 STAP1Q9ULZ2 295 aa13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 GOLGA4Q13439 2230 aaKnown RBP13.37□□□□□ -0.27
HMGCS1-205ENST00000508319 NBEAQ8NFP9 2946 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 A0A1W2PR77 199 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 SRRM3A6NNA2 597 aaPredicted RBP13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 F8VZ95 297 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 PLK4O00444 970 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 PES1O00541 588 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 WNT9AO14904 365 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 LATO43561 262 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 LSM8O95777 96 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 FLT3P36888 993 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 GRK6P43250 576 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 CDH4P55283 916 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 C21orf59P57076 290 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 RNASE9P60153 205 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 IL9RQ01113 521 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 SUZ12Q15022 739 aaKnown RBP13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 ALFQ53S48 1182 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 C2CD6Q53TS8 623 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 AGBL4Q5VU57 503 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 TRNP1Q6NT89 227 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 SH2D3CQ8N5H7 860 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 OR8D1Q8WZ84 308 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 C18orf8Q96DM3 657 aa13.36□□□□□ -0.27
HMGCS1-205ENST00000508319 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms