RNA–Protein interactions for RNA: ENST00000507472.5

SSBP2-207, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 3

Gene SSBP2, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-207ENST00000507472 PPP1R9BQ96SB3 815 aa16.32■□□□□ 0.2
SSBP2-207ENST00000507472 SIK2Q9H0K1 926 aa16.32■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3DA0A087WVF3 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3IA0A087WXS9 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3EA0A087X179 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3KA0A087X1G2 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3FA6NER0 549 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3LB9A6J9 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 DFNA5O60443 496 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 DAB1O75553 588 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 DKK1O94907 266 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 WNT1P04628 370 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3HP0C7X1 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 PRKCSHP14314 528 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TFE3P19532 575 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-207ENST00000507472 DRD3P35462 400 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 GRK6P43250 576 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 CCT8P50990 548 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 CCR5P51681 352 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 BPIFB4P59827 614 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 IL9RQ01113 521 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 SCAPQ12770 1279 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 MTA1Q13330 715 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 DRAP1Q14919 205 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-207ENST00000507472 ACCSLQ4AC99 568 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3GQ6DHY5 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3CQ6IPX1 549 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 FAM114A1Q8IWE2 563 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D3Q8IZP1 549 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-207ENST00000507472 ZNF397Q8NF99 534 aaPredicted RBP16.31■□□□□ 0.2
SSBP2-207ENST00000507472 SPAG5Q96R06 1193 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 NPY6RQ99463 290 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 CLSTN2Q9H4D0 955 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 ANLNQ9NQW6 1124 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 AASDHPPTQ9NRN7 309 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 SARDHQ9UL12 918 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 OR51B4Q9Y5P0 310 aa16.31■□□□□ 0.2
SSBP2-207ENST00000507472 A0A1B0GTQ1 180 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 FAM170AA1A519 330 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 I6L893 689 aaPredicted RBP16.3■□□□□ 0.2
SSBP2-207ENST00000507472 PLK4O00444 970 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 TNFSF14O43557 240 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 ATP9BO43861 1147 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 CLDN11O75508 207 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 ADCY5O95622 1261 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 CD38P28907 300 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 CXCR3P49682 368 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 VASPP50552 380 aaPredicted RBP16.3■□□□□ 0.2
SSBP2-207ENST00000507472 KCNMA1Q12791 1236 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 RAPGEF1Q13905 1077 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 DLG2Q15700 870 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 C5orf22Q49AR2 442 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 OTUD1Q5VV17 481 aaPredicted RBP16.3■□□□□ 0.2
SSBP2-207ENST00000507472 ZDHHC17Q8IUH5 632 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 TMEM35BQ8NCS4 154 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 SKA1Q96BD8 255 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 ELF4Q99607 663 aaPredicted RBP16.3■□□□□ 0.2
SSBP2-207ENST00000507472 TKTL2Q9H0I9 626 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 PDCL3Q9H2J4 239 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 WDCPQ9H6R7 721 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 PIGVQ9NUD9 493 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.3■□□□□ 0.22e-6■■■■■ 42.2
SSBP2-207ENST00000507472 VPS28Q9UK41 221 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 TBC1D30Q9Y2I9 924 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 SNX10Q9Y5X0 201 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 ATRXP46100 2492 aa16.3■□□□□ 0.2
SSBP2-207ENST00000507472 LAMA5O15230 3695 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 A0A1W2PR77 199 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 RTN2O75298 545 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 CNTN5O94779 1100 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 CYP11B1P15538 503 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 ERCC5P28715 1186 aaPredicted RBP16.29■□□□□ 0.2
SSBP2-207ENST00000507472 CDH5P33151 784 aaPredicted RBP16.29■□□□□ 0.2
SSBP2-207ENST00000507472 PPP2CBP62714 309 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 PPP2CAP67775 309 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 KLHDC7AQ5VTJ3 777 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 TMPRSS7Q7RTY8 843 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 DSG4Q86SJ6 1040 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 GATAD2AQ86YP4 633 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 OR8D1Q8WZ84 308 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 NT5C3BQ969T7 300 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 FAM131CQ96AQ9 280 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 C18orf8Q96DM3 657 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 SERAC1Q96JX3 654 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 ARHGEF38Q9NXL2 777 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 RRN3Q9NYV6 651 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 SLC25A13Q9UJS0 675 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 PPM1HQ9ULR3 514 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 FHOD1Q9Y613 1164 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 NBEAQ8NFP9 2946 aa16.29■□□□□ 0.2
SSBP2-207ENST00000507472 PLXNB3Q9ULL4 1909 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 TLR4O00206 839 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 MCF2LO15068 1137 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 LATO43561 262 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 MT-CO1P00395 513 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 F9P00740 461 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 GABRB2P47870 512 aa16.28■□□□□ 0.2
SSBP2-207ENST00000507472 SULT1E1P49888 294 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms