RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 SARDHQ9UL12 918 aa17.22■□□□□ 0.35
PDLIM7-215ENST00000506161 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.22■□□□□ 0.35
PDLIM7-215ENST00000506161 KNL1Q8NG31 2342 aa17.22■□□□□ 0.35
PDLIM7-215ENST00000506161 IGF2RP11717 2491 aa17.22■□□□□ 0.35
PDLIM7-215ENST00000506161 A0A0D9SEW6 157 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 SPAARA0A1B0GVQ0 90 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 LRRC10BA6NIK2 292 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 K7ERQ8 282 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 WNT9AO14904 365 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 SEMA4FO95754 770 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 MT-CO1P00395 513 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 DNTTP04053 509 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 CSRP1P21291 193 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 MMP8P22894 467 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 DRD3P35462 400 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 DPP6P42658 865 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 PSMD8P48556 350 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 ST8SIA6P61647 398 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 ATP11AP98196 1134 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 WDR45BQ5MNZ6 344 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 RABGAP1LQ5R372 815 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 RNF219Q5W0B1 726 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 ZNF557Q8N988 423 aaPredicted RBP17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 KDM1BQ8NB78 822 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 SNX19Q92543 992 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 ERGIC2Q96RQ1 377 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 SCNM1Q9BWG6 230 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 WDCPQ9H6R7 721 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 DNAAF2Q9NVR5 837 aaKnown RBP17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 SLC12A6Q9UHW9 1150 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 NEU3Q9UQ49 428 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 TBC1D30Q9Y2I9 924 aa17.21■□□□□ 0.35
PDLIM7-215ENST00000506161 PTPRBP23467 1997 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 PLXNB3Q9ULL4 1909 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 EDDM13A0A1B0GTR0 161 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 A0A1B0GTW7 788 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 A0A1B0GVT2 93 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 DRGXA6NNA5 263 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 CSNK1EP49674 416 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 GALCP54803 685 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 UBXN1Q04323 297 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 E2F5Q15329 346 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 CCDC14Q49A88 953 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 BRMS1LQ5PSV4 323 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 FKBP15Q5T1M5 1219 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 SYCP2LQ5T4T6 812 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 E4F1Q66K89 784 aaPredicted RBP17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 TFAP2DQ7Z6R9 452 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 DNAAF5Q86Y56 855 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 FUCA2Q9BTY2 467 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 BTBD1Q9H0C5 482 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 FBXL12Q9NXK8 326 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 STAP1Q9ULZ2 295 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 FNDC3AQ9Y2H6 1198 aaKnown RBP17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 ACTL7AQ9Y615 435 aa17.2■□□□□ 0.34
PDLIM7-215ENST00000506161 IGLV3-10A0A075B6K4 115 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 TCRBV5S1A1TA0A578 114 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 TARSL2A2RTX5 802 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 E9PAM4 449 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 KCNK3O14649 394 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 BCAT2O15382 392 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 SMAD6O43541 496 aaKnown RBP17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 ENDOD1O94919 500 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 FSBPO95073 299 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 MOCS3O95396 460 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 MBD3O95983 291 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 SRCP12931 536 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 SLC8A1P32418 973 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 STAT1P42224 750 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 CDH4P55283 916 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 ZBTB16Q05516 673 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 SLC12A1Q13621 1099 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 CDO1Q16878 200 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 POM121L1PQ3SYA9 428 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 TTC39BQ5VTQ0 682 aaPredicted RBP17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 NCEH1Q6PIU2 408 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 Q6ZVU0 165 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 ZNF677Q86XU0 584 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 OR7D4Q8NG98 312 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 RXFP2Q8WXD0 754 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 SPAG5Q96R06 1193 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 SYT11Q9BT88 431 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 FBRSQ9HAH7 460 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 TM9SF3Q9HD45 589 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 NDFIP2Q9NV92 336 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 RRN3Q9NYV6 651 aa17.19■□□□□ 0.34
PDLIM7-215ENST00000506161 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 FAM47DPA6NHR8 397 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 C2CD4BA6NLJ0 364 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 ATP9BO43861 1147 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 SH3BP5O60239 455 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 WNT1P04628 370 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 CTSLP07711 333 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 CEACAM1P13688 526 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 PPP2CBP62714 309 aa17.18■□□□□ 0.34
PDLIM7-215ENST00000506161 PPP2CAP67775 309 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms