RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 VPS16Q9H269 839 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 GANQ9H2C0 597 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 OSGEPQ9NPF4 335 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 TOR4AQ9NXH8 423 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 ARHGEF38Q9NXL2 777 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.16□□□□□ -0.3
RNF4-206ENST00000504782 MPP6Q9NZW5 540 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 ADAMTS1Q9UHI8 967 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 MSRB2Q9Y3D2 182 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 NEUROG3Q9Y4Z2 214 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 PCDHB9Q9Y5E1 797 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 KNL1Q8NG31 2342 aa13.16□□□□□ -0.3
RNF4-206ENST00000504782 CEP295Q9C0D2 2601 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.15□□□□□ -0.3
RNF4-206ENST00000504782 A0A1W2PPC4 97 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 F8VZ95 297 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 GOLGA8SH3BPF8 625 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 K7ERQ8 282 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 SNAP91O60641 907 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 RTN2O75298 545 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 ATXN1LP0C7T5 689 aaKnown RBP13.15□□□□□ -0.3
RNF4-206ENST00000504782 ZNF883P0CG24 379 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 GOT1P17174 413 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 CTSKP43235 329 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 ADPRHP54922 357 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 PPP2CBP62714 309 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 PPP2CAP67775 309 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 ZNF177Q13360 481 aaPredicted RBP13.15□□□□□ -0.3
RNF4-206ENST00000504782 SLC12A1Q13621 1099 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 C5orf22Q49AR2 442 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 ACCSLQ4AC99 568 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 FAM102AQ5T9C2 384 aaPredicted RBP13.15□□□□□ -0.3
RNF4-206ENST00000504782 IL27RAQ6UWB1 636 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 ERICH1Q86X53 443 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 TMEM35BQ8NCS4 154 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 OR14C36Q8NHC7 312 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 RHBDD1Q8TEB9 315 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 C18orf8Q96DM3 657 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 CFAP57Q96MR6 1250 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 MAGEB5Q9BZ81 275 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 PDCL3Q9H2J4 239 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 WDCPQ9H6R7 721 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 SCML1Q9UN30 329 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 TBC1D30Q9Y2I9 924 aa13.15□□□□□ -0.3
RNF4-206ENST00000504782 A0A0D9SEW6 157 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 FAM221BA6H8Z2 402 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 GOLGA8CPA6NN73 597 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 ATP9BO43861 1147 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 GJB6O95452 261 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 CHRNB2P17787 502 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 C5AR1P21730 350 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 GLDCP23378 1020 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 BPIFB4P59827 614 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 NOMO3P69849 1222 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 DEUP1Q05D60 604 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 HNRNPDQ14103 355 aaKnown RBP13.14□□□□□ -0.31
RNF4-206ENST00000504782 KRT31Q15323 416 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 SHBQ15464 509 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 TEAD4Q15561 434 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 DLG2Q15700 870 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 TTC39BQ5VTQ0 682 aaPredicted RBP13.14□□□□□ -0.31
RNF4-206ENST00000504782 CDKAL1Q5VV42 579 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 NAA35Q5VZE5 725 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 CLEC17AQ6ZS10 378 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 Q6ZVU0 165 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 SND1Q7KZF4 910 aaKnown RBP eCLIP13.14□□□□□ -0.31
RNF4-206ENST00000504782 BNIPLQ7Z465 357 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 EMC1Q8N766 993 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 OR2T34Q8NGX1 318 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 EPS8L1Q8TE68 723 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 ADAMTS14Q8WXS8 1223 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 STK33Q9BYT3 514 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 DACH1Q9UI36 760 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 TMEM59LQ9UK28 342 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 NOCTQ9UK39 431 aaKnown RBP13.14□□□□□ -0.31
RNF4-206ENST00000504782 VPS28Q9UK41 221 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 FZD4Q9ULV1 537 aa13.14□□□□□ -0.31
RNF4-206ENST00000504782 A0A1W2PR77 199 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 LRRC72A6NJI9 287 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 DRGXA6NNA5 263 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 TAF4O00268 1085 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 SMAD6O43541 496 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 BNIP3LO60238 219 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CLDN11O75508 207 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 GFPT2O94808 682 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ADH1BP00325 375 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CAPNS1P04632 268 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CTSLP07711 333 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 SRCP12931 536 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ZNF18P17022 549 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 EEF1GP26641 437 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 MAT2AP31153 395 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 NNMTP40261 264 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CDH4P55283 916 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 SNX16P57768 344 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 RACK1P63244 317 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 SULT2A1Q06520 285 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CNTN1Q12860 1018 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ELAVL3Q14576 367 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 ZNF423Q2M1K9 1284 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms