RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ARHGAP17Q68EM7 881 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 NEPROQ6NW34 567 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 NECAB2Q7Z6G3 386 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 OR6K2Q8NGY2 324 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 RFWD2Q8NHY2 731 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 NKD2Q969F2 451 aaPredicted RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 NCLNQ969V3 563 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 FAM167BQ9BTA0 163 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 UPF3AQ9H1J1 476 aaKnown RBP14.37□□□□□ -0.11
TCOF1-207ENST00000504761 IL1RL2Q9HB29 575 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 SLC25A13Q9UJS0 675 aa14.37□□□□□ -0.11
TCOF1-207ENST00000504761 IGKV6-21A0A0C4DH24 114 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 GJA9P57773 515 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 CERCAMQ5T4B2 595 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 EFHD1Q9BUP0 239 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 STRA6Q9BX79 667 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 CLPBQ9H078 707 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 CNTN3Q9P232 1028 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 VPS26AO75436 327 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 SOX4Q06945 474 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-207ENST00000504761 EML3Q32P44 896 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 CST9Q5W186 159 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 C17orf99Q6UX52 265 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 GLT6D1Q7Z4J2 308 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 CIR1Q86X95 450 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-207ENST00000504761 REM2Q8IYK8 340 aaPredicted RBP14.36□□□□□ -0.11
TCOF1-207ENST00000504761 STK32AQ8WU08 396 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 BCO2Q9BYV7 579 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 SPG21Q9NZD8 308 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 RNF112Q9ULX5 631 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 SCN7AQ01118 1682 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 HEATR9A2RTY3 570 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 NRP1O14786 923 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 ALOX15BO15296 676 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 TBL1XO60907 577 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 EDN1P05305 212 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 PTPN9P43378 593 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 GLUD2P49448 558 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 PSEN1P49768 467 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 SERPINH1P50454 418 aaKnown RBP14.36□□□□□ -0.11
TCOF1-207ENST00000504761 NPAS4Q8IUM7 802 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 SDCCAG3Q96C92 435 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 PIWIL1Q96J94 861 aaKnown RBP14.36□□□□□ -0.11
TCOF1-207ENST00000504761 EBNA1BP2Q99848 306 aaKnown RBP14.36□□□□□ -0.11
TCOF1-207ENST00000504761 CERS4Q9HA82 394 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 KLC4Q9NSK0 619 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 FAM50BQ9Y247 325 aa14.36□□□□□ -0.11
TCOF1-207ENST00000504761 LZTS3O60299 673 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 UBOX5O94941 541 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 PTGIRP43119 386 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CDK16Q00536 496 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 PLIN5Q00G26 463 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 POU4F1Q01851 419 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CTBP1Q13363 440 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 LRRC39Q96DD0 335 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CERS2Q96G23 380 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CASS4Q9NQ75 786 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 SYBUQ9NX95 663 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 VGLL3A8MV65 326 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 C9IYK1 514 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 E9PBE3 544 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 KLHL41O60662 606 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 NUDT17P0C025 328 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 NME5P56597 212 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CNGA3Q16281 694 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 ADCK2Q7Z695 626 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 AUTS2Q8WXX7 1259 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 USP13Q92995 863 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 ASAH2Q9NR71 780 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 COL4A1P02462 1669 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 KAT6AQ92794 2004 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 EOMESO95936 686 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 ITGALP20701 1170 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 ZNF135P52742 658 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 DDX39BQ13838 428 aaKnown RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 SPANXN3Q5MJ09 141 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CRYBG2Q8N1P7 616 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 APOPT1Q96IL0 206 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 IL22Q9GZX6 179 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 UNC93B1Q9H1C4 597 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 RGS18Q9NS28 235 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 EFR3BQ9Y2G0 817 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 MYO7AQ13402 2215 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 LAMA4Q16363 1823 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CFAP73A6NFT4 308 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 SERPIND1P05546 499 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 HOXA11P31270 313 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 LRRC36Q1X8D7 754 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 FNBP1LQ5T0N5 605 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 PARP9Q8IXQ6 854 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 PRCCQ92733 491 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 PAAF1Q9BRP4 392 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 BPIFA1Q9NP55 256 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 FBXO6Q9NRD1 293 aaPredicted RBP14.35□□□□□ -0.11
TCOF1-207ENST00000504761 TMEM161AQ9NX61 479 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 CDYLQ9Y232 598 aa14.35□□□□□ -0.11
TCOF1-207ENST00000504761 TPP1O14773 563 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 TM9SF1O15321 606 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 FAM155BO75949 473 aa14.34□□□□□ -0.11
TCOF1-207ENST00000504761 PBLDP30039 288 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms