RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 CPED1A4D0V7 1026 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 C1QTNF3-AMACRE9PGA6 284 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 RIOK3O14730 519 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 EFSO43281 561 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 VAV1P15498 845 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 ITGB6P18564 788 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 STK19P49842 368 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 BST2Q10589 180 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 CNTN1Q12860 1018 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 ZNF177Q13360 481 aaPredicted RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 UBAP2LQ14157 1087 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 STK38Q15208 465 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 CDKN3Q16667 212 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 AGBL4Q5VU57 503 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 ZCCHC8Q6NZY4 707 aaKnown RBP16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 APCDD1Q8J025 514 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 CFAP52Q8N1V2 620 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 OR13H1Q8NG92 308 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 EXTL1Q92935 676 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 ARRDC3Q96B67 414 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 SGF29Q96ES7 293 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 FAXDC2Q96IV6 333 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 SEMA3CQ99985 751 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 CNGB3Q9NQW8 809 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 TSPAN16Q9UKR8 245 aa16.32■□□□□ 0.2
PDLIM7-210ENST00000503827 PDXKO00764 312 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 TCEA3O75764 348 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 NEBLO76041 1014 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 PRLRP16471 622 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 AKT2P31751 481 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 DAOAP59103 153 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 HNRNPKP61978 463 aaKnown RBP eCLIP16.31■□□□□ 0.21e-16■■■■■ 57.8
PDLIM7-210ENST00000503827 MS4A13Q5J8X5 152 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 EFL1Q7Z2Z2 1120 aaKnown RBP16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 SCML4Q8N228 414 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 KLK6Q92876 244 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 MYEOVQ96EZ4 313 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 KCTD10Q9H3F6 313 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 MMRN2Q9H8L6 949 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 DNAJC28Q9NX36 388 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 SARDHQ9UL12 918 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 RP1P56715 2156 aa16.31■□□□□ 0.2
PDLIM7-210ENST00000503827 CCDC187A0A096LP49 1063 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 PMS2P1A4D2B8 440 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 MAPK13O15264 365 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 LCP1P13796 627 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 ZNF18P17022 549 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 HNRNPA2B1P22626 353 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 SULT2A1Q06520 285 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 PPP3CAQ08209 521 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 SLC12A1Q13621 1099 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 DCAF6Q58WW2 860 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 ZNF542PQ5EBM4 170 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 NEK5Q6P3R8 708 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 GUSBP11Q6P575 273 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 DCP2Q8IU60 420 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 FAM174AQ8TBP5 190 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 KCTD13Q8WZ19 329 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 NUCKS1Q9H1E3 243 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 CAAP1Q9H8G2 361 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 BOD1L1Q8NFC6 3051 aa16.3■□□□□ 0.2
PDLIM7-210ENST00000503827 A0A1W2PQU0 124 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 EME2A4GXA9 379 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 CALUO43852 315 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 FAM87AP0C7U9 286 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 KRT13P13646 458 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 AFMP43652 599 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 NASPP49321 788 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 TLE1Q04724 770 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 STK4Q13043 487 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 CUL4BQ13620 913 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 ACCSLQ4AC99 568 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 INTS8Q75QN2 995 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 UBA3Q8TBC4 463 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 FRS2Q8WU20 508 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 IRGQQ8WZA9 623 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 TMEM8AQ9HCN3 771 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 FZD3Q9NPG1 666 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 SALL4Q9UJQ4 1053 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 PPM1HQ9ULR3 514 aa16.29■□□□□ 0.2
PDLIM7-210ENST00000503827 H3BM21 787 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 SPTLC2O15270 562 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 ALOX15BO15296 676 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 POLR2DO15514 142 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 PPP6R2O75170 966 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 PPFIA2O75334 1257 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 PDIA4P13667 645 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 CLDN2P57739 230 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 TAS2R38P59533 333 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 NUCB2P80303 420 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 CCDC15Q0P6D6 951 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 CRTC1Q6UUV9 634 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 LGI2Q8N0V4 545 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 SLC22A18ASQ8N1D0 253 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
PDLIM7-210ENST00000503827 KIAA0895Q8NCT3 520 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms