RNA–Protein interactions for RNA: ENST00000501122.2

NEAT1-202, nuclear paraspeckle assembly transcript 1, humanhuman

BASIC

Gene NEAT1, Length 22,743 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-202ENST00000501122 ASH2LQ9UBL3 628 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 DBF4Q9UBU7 674 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 WDR64B1ANS9 1081 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 TM9SF1O15321 606 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 PKLRP30613 574 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 FAM153CQ494X1 144 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 FAM228AQ86W67 206 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 FAM47BQ8NA70 645 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 MAGEC1O60732 1142 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 IL33O95760 270 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 AIF1P55008 147 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 WHRNQ9P202 907 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 KCNJ14Q9UNX9 436 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 COL4A3BPQ9Y5P4 624 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 FRMD6Q96NE9 622 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 TGIF2Q9GZN2 237 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 AASSQ9UDR5 926 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CARNS1A5YM72 827 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 SSX4O60224 188 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 PCDHGA12O60330 932 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 C1QBPQ07021 282 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 OGFOD2Q6N063 350 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 DCDC5Q6ZRR9 648 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CFL1P23528 166 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ACSL1P33121 698 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 AP3M2P53677 418 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 EIF4A1P60842 406 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CDK16Q00536 496 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 FAM131AQ6UXB0 335 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 C1orf54Q8WWF1 131 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 TRUB1Q8WWH5 349 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 MIPEPQ99797 713 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CCNT1O60563 726 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ALX3O95076 343 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 MUTP22033 750 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 RPS3P23396 243 aaKnown RBP eCLIP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 SAMD4BQ5PRF9 694 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 AGR3Q8TD06 166 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 RNF34Q969K3 372 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 GPN1Q9HCN4 374 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 STAP2Q9UGK3 403 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 REEP5Q00765 189 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 VARS2Q5ST30 1063 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ZC3HC1Q86WB0 502 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CHPFQ8IZ52 775 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 MEIOBQ8N635 442 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 SETD6Q8TBK2 473 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 SGTBQ96EQ0 304 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CHORDC1Q9UHD1 332 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF230Q9UIE0 474 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 SSR3Q9UNL2 185 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CUL2Q13617 745 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 PCID2Q5JVF3 399 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 TTC39BQ5VTQ0 682 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 METTL23Q86XA0 190 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 KCNS3Q9BQ31 491 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ABCB9Q9NP78 766 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 C14orf166Q9Y224 244 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 SF3B1O75533 1304 aaKnown RBP eCLIP4.86□□□□□ -1.632e-6■■□□□ 13.1
NEAT1-202ENST00000501122 CYP3A5P20815 502 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 DNAJC14Q6Y2X3 702 aaPredicted RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 PEG10Q86TG7 708 aaKnown RBP4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ELMO1Q92556 727 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 PHOX2BQ99453 314 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 LY9Q9HBG7 655 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 CRYL1Q9Y2S2 319 aa4.86□□□□□ -1.63
NEAT1-202ENST00000501122 ABCA1O95477 2261 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ADAM10O14672 748 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ITM2AO43736 263 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TIPARPQ7Z3E1 657 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 CCDC185Q8N715 623 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZSCAN1Q8NBB4 408 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 HERVK_113Q902F9 699 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ANKHQ9HCJ1 492 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.85□□□□□ -1.631e-57■■■□□ 15.2
NEAT1-202ENST00000501122 PSMD13Q9UNM6 376 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DISC1C4P0D8 188 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DNAJB5O75953 348 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ACADLP28330 430 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SLC15A1P46059 708 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 ZNF33BQ06732 778 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SNAPC1Q16533 368 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 RESP18Q5W5W9 173 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DENND1AQ8TEH3 1009 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PTCD2Q8WV60 388 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TSNAXQ99598 290 aaKnown RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 SEMA4AQ9H3S1 761 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 KRBA1A5PL33 1030 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 E9PI62 339 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 TDGQ13569 410 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 BATFQ16520 125 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 RHBDF1Q96CC6 855 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 A8MX80 341 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 HEXBP07686 556 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 PTPN9P43378 593 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 KRT33BQ14525 404 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 KCTD19Q17RG1 926 aaPredicted RBP4.85□□□□□ -1.63
NEAT1-202ENST00000501122 FAM117BQ6P1L5 589 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 KCTD8Q6ZWB6 473 aa4.85□□□□□ -1.63
NEAT1-202ENST00000501122 DPF2Q92785 391 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms