RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 CCDC134Q9H6E4 229 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 OBP2BQ9NPH6 170 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 LIN7CQ9NUP9 197 aaKnown RBP5.36□□□□□ -1.55
SSR3-209ENST00000498205 TRNAU1APQ9NX07 287 aaKnown RBP5.36□□□□□ -1.55
SSR3-209ENST00000498205 COMMD10Q9Y6G5 202 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 KIAA0232Q92628 1395 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 ZMYM2Q9UBW7 1377 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 NRXN3Q9Y4C0 1643 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 C3P01024 1663 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 AKAP12Q02952 1782 aa5.36□□□□□ -1.55
SSR3-209ENST00000498205 CFAP65Q6ZU64 1925 aaKnown RBP5.36□□□□□ -1.55
SSR3-209ENST00000498205 CACNA1FO60840 1977 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 NALCNQ8IZF0 1738 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 USP54Q70EL1 1684 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 IBTKQ9P2D0 1353 aaPredicted RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 ABCC4O15439 1325 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 MBD3L5A6NJ08 208 aaPredicted RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 LGALS16A8MUM7 142 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 F8W810 466 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 RRHO14718 337 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 EPB41L2O43491 1005 aaKnown RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 DNPH1O43598 174 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 RPP40O75818 363 aaKnown RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 TOP3BO95985 862 aaKnown RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 CYP3A4P08684 503 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 IGFBP2P18065 325 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 TGM2P21980 687 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 DDIT3P35638 169 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 RHBDL3P58872 404 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 NUCB1Q02818 461 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 ZNF91Q05481 1191 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 SRSF1Q07955 248 aaKnown RBP eCLIP5.35□□□□□ -1.55
SSR3-209ENST00000498205 MTA1Q13330 715 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 PDCD2Q16342 344 aaPredicted RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 KLHL17Q6TDP4 642 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 RFX6Q8HWS3 928 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 RMDN3Q96TC7 470 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 TRMOQ9BU70 441 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 GATA5Q9BWX5 397 aaPredicted RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 TM2D2Q9BX73 214 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 AGO4Q9HCK5 861 aaKnown RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 PAPOLBQ9NRJ5 636 aaKnown RBP5.35□□□□□ -1.55
SSR3-209ENST00000498205 TMLHEQ9NVH6 421 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 DACT1Q9NYF0 836 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 DAAM1Q9Y4D1 1078 aa5.35□□□□□ -1.55
SSR3-209ENST00000498205 TOPAZ1Q8N9V7 1692 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 DIP2AQ14689 1571 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 RIMS2Q9UQ26 1411 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 ARHGEF10O15013 1369 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 AQP12BA6NM10 295 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 M0QZQ0 153 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 PRPF4O43172 522 aaKnown RBP eCLIP5.34□□□□□ -1.55
SSR3-209ENST00000498205 CSTBP04080 98 aaKnown RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 KLRK1P26718 216 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 PDIA3P30101 505 aaKnown RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 HOXA7P31268 230 aaPredicted RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 GRK5P34947 590 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 IDUAP35475 653 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 CPA2P48052 419 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 YPEL5P62699 121 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 AP2B1P63010 937 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 CHAF1AQ13111 956 aaPredicted RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 GAB1Q13480 694 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 BIRC2Q13490 618 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 KLF9Q13886 244 aaPredicted RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 Q4G0T1 1027 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 PAPD7Q5XG87 772 aaKnown RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 ANKRD40Q6AI12 368 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 TFAP2DQ7Z6R9 452 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 CCDC117Q8IWD4 279 aaPredicted RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 STYXQ8WUJ0 223 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 CPT1BQ92523 772 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 HMCESQ96FZ2 354 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 ZFYVE19Q96K21 471 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 ZNF778Q96MU6 729 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 HTATIP2Q9BUP3 242 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 API5Q9BZZ5 524 aaKnown RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 SMC4Q9NTJ3 1288 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 CHMP5Q9NZZ3 219 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 TAGLN3Q9UI15 199 aa5.34□□□□□ -1.55
SSR3-209ENST00000498205 C19orf53Q9UNZ5 99 aaPredicted RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.55
SSR3-209ENST00000498205 TTC21BQ7Z4L5 1316 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 CYP3A7-CYP3A51PA0A087WV96 503 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3DA0A087WVF3 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3IA0A087WXS9 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3EA0A087X179 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3KA0A087X1G2 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 hCG_1642624A0A1W2PR95 340 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 FSD2A1L4K1 749 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3BA6NDS4 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3FA6NER0 549 aaPredicted RBP5.33□□□□□ -1.56
SSR3-209ENST00000498205 C2CD4BA6NLJ0 364 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 C16orf96A6NNT2 1141 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3LB9A6J9 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 SOCS2O14508 198 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 PPP6R2O75170 966 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 ACTL6BO94805 426 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 TBC1D3HP0C7X1 549 aa5.33□□□□□ -1.56
SSR3-209ENST00000498205 CYP3A7P24462 503 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms