RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PRKG1Q13976 671 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 GRAMD1BQ3KR37 738 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 TTC39AQ5SRH9 613 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 MANEAQ5SRI9 462 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 ANKS1BQ7Z6G8 1248 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 TMEM200AQ86VY9 491 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 DDIASQ8IXT1 998 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 MMP21Q8N119 569 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 PTGR2Q8N8N7 351 aaPredicted RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 ZNF548Q8NEK5 533 aaPredicted RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 CCT6BQ92526 530 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 ARRDC3Q96B67 414 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 SDCCAG3Q96C92 435 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 WDR83Q9BRX9 315 aaKnown RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 MYLK2Q9H1R3 596 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 SEPSECSQ9HD40 501 aaKnown RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 PTPRHQ9HD43 1115 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 SEMA4BQ9NPR2 832 aaPredicted RBP3.18□□□□□ -1.9
RIF1-212ENST00000498041 THSD1Q9NS62 852 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 DECR2Q9NUI1 292 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 MSRB1Q9NZV6 116 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 KIF17Q9P2E2 1029 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 KCND3Q9UK17 655 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 RIPOR2Q9Y4F9 1068 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 SHROOM2Q13796 1616 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 ADCY10Q96PN6 1610 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 PTPN23Q9H3S7 1636 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 PTPRGP23470 1445 aa3.18□□□□□ -1.9
RIF1-212ENST00000498041 CCNB3Q8WWL7 1395 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 FAM90A20PA6NIJ5 464 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 E7EVH7 732 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 GRM8O00222 908 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 SEPT4O43236 478 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 MSI1O43347 362 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 ZC3H11AO75152 810 aaKnown RBP eCLIP3.17□□□□□ -1.9
RIF1-212ENST00000498041 FAM155BO75949 473 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 KRT38O76015 456 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 TFRCP02786 760 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 LCKP06239 509 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 CYP21A2P08686 494 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 PRPH2P23942 346 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 ALDH7A1P49419 539 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 AARSP49588 968 aaKnown RBP eCLIP3.17□□□□□ -1.9
RIF1-212ENST00000498041 MCM2P49736 904 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 PRKAA2P54646 552 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 CDK18Q07002 472 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 ALKBH1Q13686 389 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 GALNT3Q14435 633 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 POSTNQ15063 836 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 INPP5JQ15735 1006 aaPredicted RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 SMAD1Q15797 465 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 SMTNL2Q2TAL5 461 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 PIK3CD-AS1Q5SR53 167 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 C6orf10Q5SRN2 563 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 KIAA1324Q6UXG2 1013 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 RFX8Q6ZV50 586 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 RTL10Q7L3V2 364 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 SYT13Q7L8C5 426 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 IRF2BP2Q7Z5L9 587 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 PIM3Q86V86 326 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 KLBQ86Z14 1044 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 AFAP1Q8N556 730 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 ZNF366Q8N895 744 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 FSIP1Q8NA03 581 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 SPATA5Q8NB90 893 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 CSGALNACT1Q8TDX6 532 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 THAP4Q8WY91 577 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 CENPIQ92674 756 aaPredicted RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 GOLGA1Q92805 767 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 KAT2AQ92830 837 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 EME1Q96AY2 570 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 VCPIP1Q96JH7 1222 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 FAM167BQ9BTA0 163 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 AAMDCQ9H7C9 122 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 G6PC2Q9NQR9 355 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 SLC25A13Q9UJS0 675 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 PCDHA12Q9UN75 941 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 COG5Q9UP83 839 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 RCE1Q9Y256 329 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 PKP3Q9Y446 797 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 ZCCHC11Q5TAX3 1644 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 MAPKBP1O60336 1514 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 GPATCH8Q9UKJ3 1502 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 ABCC5O15440 1437 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 RRBP1Q9P2E9 1410 aaKnown RBP3.17□□□□□ -1.9
RIF1-212ENST00000498041 TTC37Q6PGP7 1564 aa3.17□□□□□ -1.9
RIF1-212ENST00000498041 RIMBP3CA6NJZ7 1639 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 RIMBP3BA6NNM3 1639 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 MTUS2Q5JR59 1369 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 RIMBP3Q9UFD9 1639 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 A0A0G2JK05 382 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 IGLV5-39A0A0G2JS06 123 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 CXorf65A6NEN9 183 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 FOXO6A8MYZ6 492 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 IFRD1O00458 451 aaPredicted RBP3.16□□□□□ -1.9
RIF1-212ENST00000498041 NBNO60934 754 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 NEURL1O76050 574 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 NDUFB8O95169 186 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 HLA-DQA2P01906 255 aa3.16□□□□□ -1.9
RIF1-212ENST00000498041 PSG1P11464 419 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms