RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 ENDOVQ8N8Q3 282 aaKnown RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 NOC3LQ8WTT2 800 aaKnown RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 GCC1Q96CN9 775 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 DDX23Q9BUQ8 820 aaKnown RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 SEMA4BQ9NPR2 832 aaPredicted RBP3.61□□□□□ -1.83
PSPC1-205ENST00000497722 ARL15Q9NXU5 204 aa3.61□□□□□ -1.83
PSPC1-205ENST00000497722 LMTK3Q96Q04 1460 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 IGKV2D-30A0A075B6S6 120 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 A0A0G2JK05 382 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 SLC22A23A1A5C7 686 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 F8W810 466 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 EIF3FO00303 357 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-205ENST00000497722 SMAD6O43541 496 aaKnown RBP3.6□□□□□ -1.83
PSPC1-205ENST00000497722 STRNO43815 780 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 TULP3O75386 442 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 HEXIM1O94992 359 aaKnown RBP3.6□□□□□ -1.83
PSPC1-205ENST00000497722 KAT7O95251 611 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 CYP4B1P13584 511 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 TNNT1P13805 278 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 VEGFAP15692 232 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-205ENST00000497722 CHRNA5P30532 468 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 STAT1P42224 750 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 CDK7P50613 346 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 CYP2J2P51589 502 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 PNLIPRP1P54315 467 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 DMWDQ09019 674 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 CTXN3Q4LDR2 81 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 MIDNQ504T8 468 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 FAM57BQ71RH2 274 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 B4GALNT4Q76KP1 1039 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 TMEM200AQ86VY9 491 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 KLBQ86Z14 1044 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 RFX6Q8HWS3 928 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 PAF1Q8N7H5 531 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 STAMQ92783 540 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 RILPL2Q969X0 211 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 SDCCAG3Q96C92 435 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 ZNF419Q96HQ0 510 aaPredicted RBP3.6□□□□□ -1.83
PSPC1-205ENST00000497722 TUBB6Q9BUF5 446 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 IFT27Q9BW83 186 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 ACAD9Q9H845 621 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 RMI1Q9H9A7 625 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 PLEKHA2Q9HB19 425 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 TMEM45AQ9NWC5 275 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 RRN3Q9NYV6 651 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 LUZP4Q9P127 313 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 FEM1BQ9UK73 627 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 DHDHQ9UQ10 334 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 SPATA31A5Q5VU36 1347 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 SPATA31A7Q8IWB4 1347 aa3.6□□□□□ -1.83
PSPC1-205ENST00000497722 CYP3A7-CYP3A51PA0A087WV96 503 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 TRBV5-3A0A0A0MS03 114 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 LOC102724159A0A0B4J2E5 919 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A8PA6NJQ4 464 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 MCIDASD6RGH6 385 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 STX16-NPEPL1H3BU86 382 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 STX16O14662 325 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 CREB3O43889 395 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ATG13O75143 517 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ZC3H11AO75152 810 aaKnown RBP eCLIP3.59□□□□□ -1.83
PSPC1-205ENST00000497722 EPN2O95208 641 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 TK1P04183 234 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 WEE2P0C1S8 567 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 RFPL3SP0C7P2 107 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A13PP0C7W8 464 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 FAM90A24PP0C7X0 464 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 CYP3A7P24462 503 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 PNPLA4P41247 253 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 SOX2P48431 317 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 HTR6P50406 440 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ZNF84P51523 738 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 RPS6KA3P51812 740 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 FOXL2P58012 376 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 GAD2Q05329 585 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 PWP2Q15269 919 aaKnown RBP3.59□□□□□ -1.83
PSPC1-205ENST00000497722 SMAD1Q15797 465 aaKnown RBP3.59□□□□□ -1.83
PSPC1-205ENST00000497722 GXYLT1Q4G148 440 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ALG10Q5BKT4 473 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ALG10BQ5I7T1 473 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 FBXO47Q5MNV8 452 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 TTLL5Q6EMB2 1281 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 KIAA1324Q6UXG2 1013 aaKnown RBP3.59□□□□□ -1.83
PSPC1-205ENST00000497722 IGFN1Q86VF2 1251 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 CCDC25Q86WR0 208 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ADGRF3Q8IZF5 1079 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 PTGR2Q8N8N7 351 aaPredicted RBP3.59□□□□□ -1.83
PSPC1-205ENST00000497722 SPPL3Q8TCT6 385 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 SLC2A12Q8TD20 617 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 LYZL4Q96KX0 146 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 AAMDCQ9H7C9 122 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 MOV10Q9HCE1 1003 aaKnown RBP3.59□□□□□ -1.83
PSPC1-205ENST00000497722 RIC8AQ9NPQ8 531 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 G6PC2Q9NQR9 355 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 ALKBH4Q9NXW9 302 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 FBXO4Q9UKT5 387 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 PCDHA12Q9UN75 941 aa3.59□□□□□ -1.83
PSPC1-205ENST00000497722 CXorf65A6NEN9 183 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 CYSRT1A8MQ03 144 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 B4DGG1 531 aa3.58□□□□□ -1.84
PSPC1-205ENST00000497722 RHODO00212 210 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms