RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, human

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRAPPC12-223	ENST00000497597	MYH9	P35579	1960 aa	Known RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	LINC00854	A0A1B0GVQ3	168 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CLRN2	A0PK11	232 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597		E7ENX8	843 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TK2	O00142	265 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	BIRC5	O15392	142 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	HTRA2	O43464	458 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ZNF12	P17014	697 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GART	P22102	1010 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MRPS15	P82914	257 aa	Known RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GABPA	Q06546	454 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	APOF	Q13790	326 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.83	□□□□□ -0.68	3e-11	■■■■□ 25
TRAPPC12-223	ENST00000497597	HEATR6	Q6AI08	1181 aa	Known RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	DRICH1	Q6PGQ1	229 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	STRA8	Q7Z7C7	330 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	LDHD	Q86WU2	507 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CANT1	Q8WVQ1	401 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KBTBD7	Q8WVZ9	684 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RXFP2	Q8WXD0	754 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NSMCE3	Q96MG7	304 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ZBED2	Q9BTP6	218 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	GATA5	Q9BWX5	397 aa	Predicted RBP	10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FAM96A	Q9H5X1	160 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RSAD1	Q9HA92	442 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ITM2C	Q9NQX7	267 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	MOSPD1	Q9UJG1	213 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PPME1	Q9Y570	386 aa		10.83	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC26A4	O43511	780 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ENTPD3	O75355	529 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	HNRNPL	P14866	589 aa	Known RBP eCLIP	10.82	□□□□□ -0.68	2e-11	■■■■□ 19.4
TRAPPC12-223	ENST00000497597	NT5C2	P49902	561 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PIGF	Q07326	219 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RAB39A	Q14964	217 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	INA	Q16352	499 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	IMPG1	Q17R60	797 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ZNF699	Q32M78	642 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FUT11	Q495W5	492 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ZBED5	Q49AG3	693 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ATG14	Q6ZNE5	492 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TAS2R42	Q7RTR8	314 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KIAA0319L	Q8IZA0	1049 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ZCCHC7	Q8N3Z6	543 aa	Known RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	HEXIM2	Q96MH2	286 aa	Known RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TDRD3	Q9H7E2	651 aa	Known RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FANCE	Q9HB96	536 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ABCB10	Q9NRK6	738 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PKD2L2	Q9NZM6	624 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KCND2	Q9NZV8	630 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FBXO40	Q9UH90	709 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC8A2	Q9UPR5	921 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	COL18A1	P39060	1754 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	HEATR9	A2RTY3	570 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597		H3BMQ9	156 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TAF4	O00268	1085 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NFIB	O00712	420 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TRIM13	O60858	407 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ALDOA	P04075	364 aa	Known RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SERPINB1	P30740	379 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NR4A2	P43354	598 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC7A2	P52569	658 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TUBB3	Q13509	450 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	POLD3	Q15054	466 aa	Predicted RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RPS6KA2	Q15349	733 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KCNJ8	Q15842	424 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SLC39A4	Q6P5W5	647 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NAPRT	Q6XQN6	538 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	RPS27L	Q71UM5	84 aa	Known RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	BTLA	Q7Z6A9	289 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TMC2	Q8TDI7	906 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	COG8	Q96MW5	612 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	EBNA1BP2	Q99848	306 aa	Known RBP	10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	HIPK3	Q9H422	1215 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	DNAJC28	Q9NX36	388 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	POLL	Q9UGP5	575 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	DCDC2	Q9UHG0	476 aa		10.82	□□□□□ -0.68
TRAPPC12-223	ENST00000497597		E7ESA3	106 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SOCS2	O14508	198 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TPH1	P17752	444 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ZACN	Q401N2	412 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	ARL13A	Q5H913	290 aa	Predicted RBP	10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	FAM91A1	Q658Y4	838 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CCDC81	Q6ZN84	652 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	KDELC2	Q7Z4H8	507 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CAND1	Q86VP6	1230 aa	Known RBP	10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SORT1	Q99523	831 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	OLAH	Q9NV23	265 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PRPF19	Q9UMS4	504 aa	Known RBP	10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	WNK3	Q9BYP7	1800 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	UTRN	P46939	3433 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	INPP4B	O15327	924 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PABPC1	P11940	636 aa	Known RBP	10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	S100A1	P23297	94 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	DPP6	P42658	865 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	TRPC1	P48995	793 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	PAGE2B	Q5JRK9	111 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	JADE1	Q6IE81	842 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	CHSY3	Q70JA7	882 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	NRBF2	Q96F24	287 aa		10.81	□□□□□ -0.68
TRAPPC12-223	ENST00000497597	SNX15	Q9NRS6	342 aa		10.81	□□□□□ -0.68

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