RNA–Protein interactions for RNA: ENST00000496882.5

SRRM1-220, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 834 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-220ENST00000496882 PTPN20Q4JDL3 420 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 MIIPQ5JXC2 388 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 BRMS1LQ5PSV4 323 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 ACBD5Q5T8D3 534 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 FAM102AQ5T9C2 384 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 TAF3Q5VWG9 929 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 OLFML1Q6UWY5 402 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 LRRC31Q6UY01 552 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 CLEC17AQ6ZS10 378 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 USP30Q70CQ3 517 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 DSG4Q86SJ6 1040 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 ZNF677Q86XU0 584 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 DHX40Q8IX18 779 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 CCAR2Q8N163 923 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 WDTC1Q8N5D0 677 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 TSEN2Q8NCE0 465 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 ZNF397Q8NF99 534 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 ENOX1Q8TC92 643 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 DNASE2BQ8WZ79 361 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 SKA1Q96BD8 255 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 C18orf8Q96DM3 657 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 MRRFQ96E11 262 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 SPAG5Q96R06 1193 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 KCTD15Q96SI1 283 aaPredicted RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 STK33Q9BYT3 514 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 SIK2Q9H0K1 926 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 VPS16Q9H269 839 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 WDCPQ9H6R7 721 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 PLCB1Q9NQ66 1216 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 SAMSN1Q9NSI8 373 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 LMBRD1Q9NUN5 540 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 ANO10Q9NW15 660 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 FBXL12Q9NXK8 326 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 EIF2B4Q9UI10 523 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 XPO7Q9UIA9 1087 aaKnown RBP8.08□□□□□ -1.12
SRRM1-220ENST00000496882 DAAM1Q9Y4D1 1078 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 FHOD1Q9Y613 1164 aa8.08□□□□□ -1.12
SRRM1-220ENST00000496882 CACNA1AO00555 2505 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 FAM47DPA6NHR8 397 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 GIPC1O14908 333 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 SIN3BO75182 1162 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 CLDN11O75508 207 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 RNASEH2AO75792 299 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 TRIM16O95361 564 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 MBD3O95983 291 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 ZNF16P17020 682 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 ZNF18P17022 549 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 DESP17661 470 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 ACSL1P33121 698 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 PSMD8P48556 350 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 AFF3P51826 1226 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 CDH4P55283 916 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 PITX1P78337 314 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 KRT83P78385 493 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 SIM1P81133 766 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 SHC2P98077 582 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 SEMA3BQ13214 749 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 AUHQ13825 339 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 SUZ12Q15022 739 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 CST6Q15828 149 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 STX1AQ16623 288 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 FSCBQ5H9T9 825 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 MMS22LQ6ZRQ5 1243 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 CIR1Q86X95 450 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 MMAAQ8IVH4 418 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 OR8D1Q8WZ84 308 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 RPL10LQ96L21 214 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 CCDC114Q96M63 670 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 MUC3BQ9H195 1237 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 RSPH9Q9H1X1 276 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 PABPC3Q9H361 631 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 C6orf106Q9H6K1 298 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 VPS28Q9UK41 221 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 AJAP1Q9UKB5 411 aaPredicted RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 VANGL2Q9ULK5 521 aa8.07□□□□□ -1.12
SRRM1-220ENST00000496882 TPX2Q9ULW0 747 aaKnown RBP8.07□□□□□ -1.12
SRRM1-220ENST00000496882 ITIH6Q6UXX5 1313 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 TNRC6BQ9UPQ9 1833 aaKnown RBP8.06□□□□□ -1.12
SRRM1-220ENST00000496882 A0A1W2PP55 124 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 TTC34A8MYJ7 566 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 C1QTNF3-AMACRE9PGA6 284 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 F8VZ95 297 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 GOLGA8SH3BPF8 625 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 MID1O15344 667 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 PAGE1O75459 146 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 GFPT2O94808 682 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 IL1BP01584 269 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 RHOCP08134 193 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 MMEP08473 750 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 C5AR1P21730 350 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 CD27P26842 260 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 MAPK1P28482 360 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 SLC8A1P32418 973 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 CDH5P33151 784 aaPredicted RBP8.06□□□□□ -1.12
SRRM1-220ENST00000496882 STAT1P42224 750 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 CTSOP43234 321 aaPredicted RBP8.06□□□□□ -1.12
SRRM1-220ENST00000496882 GABRB2P47870 512 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 C21orf59P57076 290 aa8.06□□□□□ -1.12
SRRM1-220ENST00000496882 POLR2FP61218 127 aaKnown RBP8.06□□□□□ -1.12
SRRM1-220ENST00000496882 MYL5Q02045 173 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms