RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 TMEM176AQ96HP8 235 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 AGPAT1Q99943 283 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 ULBP1Q9BZM6 244 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 MIS12Q9H081 205 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 BTBD1Q9H0C5 482 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 SEPT11Q9NVA2 429 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 FTSJ1Q9UET6 329 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 NOCTQ9UK39 431 aaKnown RBP12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 ZNF510Q9Y2H8 683 aa12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 EPN1Q9Y6I3 576 aaPredicted RBP12.16□□□□□ -0.46
CSNK1E-212ENST00000494610 DOCK9Q9BZ29 2069 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 PIK3R2O00459 728 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 THAP12O43422 761 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 LCA5LO95447 670 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 CYBBP04839 570 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 PNMA6AP0CW24 399 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 GZMAP12544 262 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 CD19P15391 556 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 CD27P26842 260 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 CLCN1P35523 988 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 GRIA4P48058 902 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 PSEN1P49768 467 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 RAD23BP54727 409 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 SLC8A3P57103 927 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 SNX16P57768 344 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 BNIP3Q12983 259 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 TARDBPQ13148 414 aaKnown RBP eCLIP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 SUZ12Q15022 739 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 TEAD4Q15561 434 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 TRIP4Q15650 581 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 RAB41Q5JT25 222 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 MBLAC2Q68D91 279 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 MMS22LQ6ZRQ5 1243 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 ZNF571Q7Z3V5 609 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 ADAT2Q7Z6V5 191 aaKnown RBP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 SLC47A2Q86VL8 602 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 EID2Q8N6I1 236 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 MYO19Q96H55 970 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 NOX5Q96PH1 765 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 CHP1Q99653 195 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 DCLK3Q9C098 648 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 PRORYQ9H606 182 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 PNPLA8Q9NP80 782 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 KCND1Q9NSA2 647 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 GGA2Q9UJY4 613 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 INTUQ9ULD6 942 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 PCDHGC3Q9UN70 934 aa12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 ARID1BQ8NFD5 2236 aaPredicted RBP12.15□□□□□ -0.46
CSNK1E-212ENST00000494610 COL12A1Q99715 3063 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 A0A1B0GTQ1 180 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 PYCARD-AS1I3L0S3 204 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 ENC1O14682 589 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 NPC1O15118 1278 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 KRT86O43790 486 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 PCDHGA12O60330 932 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 CALCAP01258 141 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 DNTTP04053 509 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 JUPP14923 745 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 SLC6A4P31645 630 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 CTSOP43234 321 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 EIF4HQ15056 248 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 ASTE1Q2TB18 679 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 MPPE1Q53F39 396 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 KIAA0895LQ68EN5 471 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 PCSK4Q6UW60 755 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 RAD9BQ6WBX8 426 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 TADA2BQ86TJ2 420 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 NOP9Q86U38 636 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 ZNF276Q8N554 614 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 UBA3Q8TBC4 463 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 GANCQ8TET4 914 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 CNDP2Q96KP4 475 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 CALR3Q96L12 384 aaKnown RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 SYT11Q9BT88 431 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 SLC2A11Q9BYW1 496 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 STIM2Q9P246 746 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 HESX1Q9UBX0 185 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 ADAMTS1Q9UHI8 967 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 PLA2G4CQ9UP65 541 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 PPP2R2CQ9Y2T4 447 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 PIEZO2Q9H5I5 2752 aa12.14□□□□□ -0.47
CSNK1E-212ENST00000494610 HECTD1Q9ULT8 2610 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 BOD1L1Q8NFC6 3051 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 A0A1W2PP55 124 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 YJEFN3A6XGL0 299 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 E7ENQ6 273 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 MID1O15344 667 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 TBL1XO60907 577 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 SIN3BO75182 1162 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 GABBR2O75899 941 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 ZBED1O96006 694 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 PLEKP08567 350 aaPredicted RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 SETSIPP0DME0 302 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 MYBL1P10243 752 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 PABPC1P11940 636 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 KRT10P13645 584 aa12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 NSFP46459 744 aaKnown RBP12.13□□□□□ -0.47
CSNK1E-212ENST00000494610 VAV2P52735 878 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms