RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 LDOC1O95751 146 aaPredicted RBP13.03□□□□□ -0.32
SKA1-205ENST00000494518 ADH1BP00325 375 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 IGLV3-25P01717 112 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 C5AR1P21730 350 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 DRD3P35462 400 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 CCR5P51681 352 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
SKA1-205ENST00000494518 BNIP3Q12983 259 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 PAK1Q13153 545 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 MORC3Q14149 939 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 ARID5BQ14865 1188 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 ACCSLQ4AC99 568 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 CXorf57Q6NSI4 855 aaKnown RBP13.03□□□□□ -0.32
SKA1-205ENST00000494518 DEFB106AQ8N104 65 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 KDM1BQ8NB78 822 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 OR52K2Q8NGK3 314 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 SAP25Q8TEE9 199 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 BBC3Q96PG8 261 aaPredicted RBP13.03□□□□□ -0.32
SKA1-205ENST00000494518 PRMT1Q99873 361 aaKnown RBP13.03□□□□□ -0.32
SKA1-205ENST00000494518 MYOCQ99972 504 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 GDF3Q9NR23 364 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 DDIT4Q9NX09 232 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 SARDHQ9UL12 918 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 CNTN6Q9UQ52 1028 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 DOCK4Q8N1I0 1966 aa13.03□□□□□ -0.32
SKA1-205ENST00000494518 BECN2A8MW95 431 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 KCNU1A8MYU2 1149 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 TLR4O00206 839 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 DFNA5O60443 496 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 SDC3O75056 442 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 GADD45BO75293 160 aaPredicted RBP13.02□□□□□ -0.33
SKA1-205ENST00000494518 EPHA8P29322 1005 aaPredicted RBP13.02□□□□□ -0.33
SKA1-205ENST00000494518 NNMTP40261 264 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 PPP1R2P41236 205 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 NXPH1P58417 271 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 CDK17Q00537 523 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 NME3Q13232 169 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
SKA1-205ENST00000494518 FBXL22Q6P050 247 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 TMEM110Q86TL2 294 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 PDCD7Q8N8D1 485 aaKnown RBP13.02□□□□□ -0.33
SKA1-205ENST00000494518 SKA1Q96BD8 255 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 RPRD1AQ96P16 312 aaPredicted RBP13.02□□□□□ -0.33
SKA1-205ENST00000494518 MED15Q96RN5 788 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 CPXM1Q96SM3 734 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 THAP9Q9H5L6 903 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 CAAP1Q9H8G2 361 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 VANGL2Q9ULK5 521 aa13.02□□□□□ -0.33
SKA1-205ENST00000494518 A0A1B0GVM2 712 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 TCAF2A6NFQ2 919 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 RIOK3O14730 519 aaKnown RBP13.01□□□□□ -0.33
SKA1-205ENST00000494518 RFPL3O75679 317 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 JUPP14923 745 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 SLC9A1P19634 815 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 ACADVLP49748 655 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 CNTN1Q12860 1018 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 RABGAP1LQ5R372 815 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 HES3Q5TGS1 186 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 OR6B2Q6IFH4 312 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 NAPEPLDQ6IQ20 393 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 FAM183BPQ6ZVS7 135 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 Q6ZVU0 165 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 BEND5Q7L4P6 421 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 C14orf80Q86SX3 495 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 SPATS2Q86XZ4 545 aaKnown RBP13.01□□□□□ -0.33
SKA1-205ENST00000494518 WDTC1Q8N5D0 677 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 C1orf131Q8NDD1 294 aaKnown RBP13.01□□□□□ -0.33
SKA1-205ENST00000494518 PIP4K2CQ8TBX8 421 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 STK32AQ8WU08 396 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 FRS2Q8WU20 508 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 OR8D1Q8WZ84 308 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 KLK6Q92876 244 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 SPAG5Q96R06 1193 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 TRIM62Q9BVG3 475 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.01□□□□□ -0.33
SKA1-205ENST00000494518 SLC12A6Q9UHW9 1150 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 SLC25A13Q9UJS0 675 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 AJAP1Q9UKB5 411 aaPredicted RBP13.01□□□□□ -0.33
SKA1-205ENST00000494518 SNX10Q9Y5X0 201 aa13.01□□□□□ -0.33
SKA1-205ENST00000494518 HELZ2Q9BYK8 2649 aaKnown RBP13□□□□□ -0.33
SKA1-205ENST00000494518 C10orf142B7Z368 130 aa13□□□□□ -0.33
SKA1-205ENST00000494518 GNA14O95837 355 aa13□□□□□ -0.33
SKA1-205ENST00000494518 PNMA6AP0CW24 399 aaPredicted RBP13□□□□□ -0.33
SKA1-205ENST00000494518 ZNF18P17022 549 aa13□□□□□ -0.33
SKA1-205ENST00000494518 CCR1P32246 355 aa13□□□□□ -0.33
SKA1-205ENST00000494518 ARRB1P49407 418 aaPredicted RBP13□□□□□ -0.33
SKA1-205ENST00000494518 MARSP56192 900 aaKnown RBP13□□□□□ -0.33
SKA1-205ENST00000494518 SEMG2Q02383 582 aa13□□□□□ -0.33
SKA1-205ENST00000494518 EIF4EBP2Q13542 120 aaPredicted RBP13□□□□□ -0.33
SKA1-205ENST00000494518 AUHQ13825 339 aaKnown RBP13□□□□□ -0.33
SKA1-205ENST00000494518 DLG2Q15700 870 aa13□□□□□ -0.33
SKA1-205ENST00000494518 SLC45A4Q5BKX6 768 aa13□□□□□ -0.33
SKA1-205ENST00000494518 AGBL4Q5VU57 503 aa13□□□□□ -0.33
SKA1-205ENST00000494518 TRIM65Q6PJ69 517 aa13□□□□□ -0.33
SKA1-205ENST00000494518 PRPF39Q86UA1 669 aaKnown RBP13□□□□□ -0.33
SKA1-205ENST00000494518 TMPRSS12Q86WS5 348 aa13□□□□□ -0.33
SKA1-205ENST00000494518 ALG14Q96F25 216 aa13□□□□□ -0.33
SKA1-205ENST00000494518 PPP1R13BQ96KQ4 1090 aa13□□□□□ -0.33
SKA1-205ENST00000494518 SLC2A13Q96QE2 648 aa13□□□□□ -0.33
SKA1-205ENST00000494518 SIK2Q9H0K1 926 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms