RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 PLK1P53350 603 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 ECT2LQ008S8 904 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 ZBTB16Q05516 673 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 GRIK2Q13002 908 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 TBX2Q13207 712 aaPredicted RBP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 RAB6CQ53S08 254 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 WDR45BQ5MNZ6 344 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 SYCP2LQ5T4T6 812 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 ERICH1Q86X53 443 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 ZDHHC17Q8IUH5 632 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 FRS2Q8WU20 508 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 PTPRN2Q92932 1015 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 C18orf8Q96DM3 657 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 TBCBQ99426 244 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 RAB6CQ9H0N0 254 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 PABPC3Q9H361 631 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 DEF6Q9H4E7 631 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 ABHD10Q9NUJ1 306 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 DNAAF2Q9NVR5 837 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 SUN2Q9UH99 717 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 EIF2B4Q9UI10 523 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 NYNRINQ9P2P1 1898 aaKnown RBP13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 CACNA1BQ00975 2339 aa13.07□□□□□ -0.32
SEC61A1-206ENST00000491668 CHD6Q8TD26 2715 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 A0A1B0GTW7 788 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 UPK3BL1B0FP48 263 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 UPK3BL2E5RIL1 263 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 CNTN5O94779 1100 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 SEMA4FO95754 770 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 LSM8O95777 96 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 TOP3BO95985 862 aaKnown RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 CYP1A1P04798 512 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 SERPING1P05155 500 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 IGHV4-34P06331 123 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 SKILP12757 684 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 CEACAM1P13688 526 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 METAP1P53582 386 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 FAM193AP78312 1265 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 SHC2P98077 582 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 FMO1Q01740 532 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 CDR2Q01850 454 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 SLC25A52Q3SY17 297 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 ALFQ53S48 1182 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 FAM102AQ5T9C2 384 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 TTC39BQ5VTQ0 682 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 NAA35Q5VZE5 725 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 ZNF776Q68DI1 518 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 IRF2BP2Q7Z5L9 587 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 RABEPKQ7Z6M1 372 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 AADATQ8N5Z0 425 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 MSANTD4Q8NCY6 345 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 RNF34Q969K3 372 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 PGAP3Q96FM1 320 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 RPRD1AQ96P16 312 aaPredicted RBP13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 PCDHB18PQ96TA0 734 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 DNAJC7Q99615 494 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 AGPAT1Q99943 283 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 FEM1AQ9BSK4 669 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 TKTL2Q9H0I9 626 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 MIR1-1HGQ9H1L0 117 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 PCED1AQ9H1Q7 454 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 HAUS4Q9H6D7 363 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 IL21RQ9HBE5 538 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 SLC12A6Q9UHW9 1150 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 TBC1D30Q9Y2I9 924 aa13.06□□□□□ -0.32
SEC61A1-206ENST00000491668 TARSL2A2RTX5 802 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 GOLGA8SH3BPF8 625 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 MID1O15344 667 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 BCAT2O15382 392 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 DNTTP04053 509 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 PTMAP06454 111 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 PRKCIP41743 596 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 SULT1E1P49888 294 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 GSDMDP57764 484 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 SNX16P57768 344 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 ST8SIA6P61647 398 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 ZNF252P-AS1Q0IIN9 211 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 SLC12A1Q13621 1099 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 CST6Q15828 149 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 RABGAP1LQ5R372 815 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 TRIM72Q6ZMU5 477 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 USP30Q70CQ3 517 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 MMAAQ8IVH4 418 aaKnown RBP13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 CCDC117Q8IWD4 279 aaPredicted RBP13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 STK40Q8N2I9 435 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 EMC1Q8N766 993 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 BIRC7Q96CA5 298 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 CAMK1GQ96NX5 476 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 SIK2Q9H0K1 926 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 RRN3Q9NYV6 651 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 ZNF212Q9UDV6 495 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 SUSD2Q9UGT4 822 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 DMXL2Q8TDJ6 3036 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 FREM2Q5SZK8 3169 aa13.05□□□□□ -0.32
SEC61A1-206ENST00000491668 CABIN1Q9Y6J0 2220 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 EDDM13A0A1B0GTR0 161 aa13.04□□□□□ -0.32
SEC61A1-206ENST00000491668 SPAARA0A1B0GVQ0 90 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms