RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 TNKS2Q9H2K2 1166 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 LMBRD1Q9NUN5 540 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 NDFIP2Q9NV92 336 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 CHMP5Q9NZZ3 219 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 KIAA1522Q9P206 1035 aaPredicted RBP9.17□□□□□ -0.94
HDAC3-211ENST00000491581 SUSD2Q9UGT4 822 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 PCDHB9Q9Y5E1 797 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 ACACBO00763 2458 aa9.17□□□□□ -0.94
HDAC3-211ENST00000491581 TDRD6O60522 2096 aaKnown RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 ADAMTS20P59510 1910 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 EDDM13A0A1B0GTR0 161 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 C10orf142B7Z368 130 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CASC3O15234 703 aaKnown RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 HSF2BPO75031 334 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 SDC3O75056 442 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 GFPT2O94808 682 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 PRLRP16471 622 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 ABCB4P21439 1286 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CD27P26842 260 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 GKP32189 559 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 KRT9P35527 623 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CTSKP43235 329 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 AFF3P51826 1226 aaKnown RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 TAS2R38P59533 333 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 ZNF445P59923 1031 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CDK17Q00537 523 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 PTK2Q05397 1052 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CNTN1Q12860 1018 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 NNTQ13423 1086 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CDO1Q16878 200 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 C15orf59Q2T9L4 293 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 TTC31Q49AM3 519 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 FAM102AQ5T9C2 384 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 KLHDC7AQ5VTJ3 777 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 DHRS13Q6UX07 377 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 ENOSF1Q7L5Y1 443 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 FAM131BQ86XD5 332 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 SPATS2Q86XZ4 545 aaKnown RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 KDF1Q8NAX2 398 aaPredicted RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 MLKLQ8NB16 471 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 JOSD2Q8TAC2 188 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 ARRDC3Q96B67 414 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 PCDHB18PQ96TA0 734 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 NUP62CLQ9H1M0 184 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 GANQ9H2C0 597 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 NLRC4Q9NPP4 1024 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 AASDHPPTQ9NRN7 309 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 METTL5Q9NRN9 209 aaKnown RBP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.16□□□□□ -0.94
HDAC3-211ENST00000491581 SUN2Q9UH99 717 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 MSRB2Q9Y3D2 182 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 NEUROG3Q9Y4Z2 214 aa9.16□□□□□ -0.94
HDAC3-211ENST00000491581 CACNA1BQ00975 2339 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3DA0A087WVF3 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3IA0A087WXS9 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3EA0A087X179 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3KA0A087X1G2 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 A0A1B0GVM2 712 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 A0A1W2PPC4 97 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 A0A1W2PR77 199 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TYW5A2RUC4 315 aaKnown RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3FA6NER0 549 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TCAF2A6NFQ2 919 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3LB9A6J9 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 F8VZ95 297 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 FAM72CH0Y354 149 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SART1O43290 800 aaKnown RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SRGAP2O75044 1071 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 FGFR1OPO95684 399 aaKnown RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 CER1O95813 267 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ASLP04424 464 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SRPRAP08240 638 aaKnown RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3HP0C7X1 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SRCP12931 536 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ZNF18P17022 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 CCR1P32246 355 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 NOS2P35228 1153 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 DPP6P42658 865 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 NOMO3P69849 1222 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ATP11AP98196 1134 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 DEUP1Q05D60 604 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 DLG2Q15700 870 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TCP11X2Q5H9J9 407 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 LRRC73Q5JTD7 316 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 EFHC1Q5JVL4 640 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 FAM72AQ5TYM5 149 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 AGBL4Q5VU57 503 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3GQ6DHY5 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3CQ6IPX1 549 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 FAM72DQ6L9T8 149 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 DBX2Q6ZNG2 339 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 NYAP1Q6ZVC0 841 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 BEND5Q7L4P6 421 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 SLC26A9Q7LBE3 791 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 RABEPKQ7Z6M1 372 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 ADAT2Q7Z6V5 191 aaKnown RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 FAM72BQ86X60 149 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 TBC1D3Q8IZP1 549 aaPredicted RBP9.15□□□□□ -0.94
HDAC3-211ENST00000491581 OR6K2Q8NGY2 324 aa9.15□□□□□ -0.94
HDAC3-211ENST00000491581 PIP4K2CQ8TBX8 421 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms