RNA–Protein interactions for RNA: ENST00000490942.1

TRA2A-208, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-208ENST00000490942 CCR3P51677 355 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 CLCN6P51797 869 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 GEMIN4P57678 1058 aaKnown RBP16.23■□□□□ 0.19
TRA2A-208ENST00000490942 COPS2P61201 443 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 ATP13A4Q4VNC1 1196 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 ODF2Q5BJF6 829 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 RNF219Q5W0B1 726 aaPredicted RBP16.23■□□□□ 0.19
TRA2A-208ENST00000490942 AFMIDQ63HM1 303 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 SDE2Q6IQ49 451 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 RETSATQ6NUM9 610 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 TMCO3Q6UWJ1 677 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 METTL3Q86U44 580 aaKnown RBP16.23■□□□□ 0.19
TRA2A-208ENST00000490942 LRRC49Q8IUZ0 686 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 RCOR2Q8IZ40 523 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 TMEM105Q8N8V8 129 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 OR52K2Q8NGK3 314 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 ATRIPQ8WXE1 791 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 RBM41Q96IZ5 413 aaKnown RBP16.23■□□□□ 0.19
TRA2A-208ENST00000490942 ZNF830Q96NB3 372 aaPredicted RBP16.23■□□□□ 0.19
TRA2A-208ENST00000490942 GABRG3Q99928 467 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 CALN1Q9BXU9 219 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 CIPCQ9C0C6 399 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 GOLPH3Q9H4A6 298 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 LRRC19Q9H756 370 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 KCND1Q9NSA2 647 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 RBM12Q9NTZ6 932 aaKnown RBP16.23■□□□□ 0.19
TRA2A-208ENST00000490942 VPS28Q9UK41 221 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 MMP17Q9ULZ9 603 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 EFR3BQ9Y2G0 817 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 CAPN6Q9Y6Q1 641 aa16.23■□□□□ 0.19
TRA2A-208ENST00000490942 MIA3Q5JRA6 1907 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 C3orf70A6NLC5 250 aaPredicted RBP16.22■□□□□ 0.19
TRA2A-208ENST00000490942 PI15O43692 258 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 KRT1P04264 644 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 C7P10643 843 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 ZFXP17010 805 aaPredicted RBP16.22■□□□□ 0.19
TRA2A-208ENST00000490942 MZF1P28698 734 aaPredicted RBP16.22■□□□□ 0.19
TRA2A-208ENST00000490942 NTSR1P30989 418 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 HOXA6P31267 233 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 ECT2LQ008S8 904 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 POLD3Q15054 466 aaPredicted RBP16.22■□□□□ 0.19
TRA2A-208ENST00000490942 PPP2R5EQ16537 467 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 PTPRNQ16849 979 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 ANKRD20A8PQ5CZ79 823 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 ZFYVE27Q5T4F4 411 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 APCDD1Q8J025 514 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 UBL4BQ8N7F7 174 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 IL17RCQ8NAC3 791 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 CASKIN2Q8WXE0 1202 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 RAPGEF5Q92565 580 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 ARHGEF2Q92974 986 aaKnown RBP16.22■□□□□ 0.19
TRA2A-208ENST00000490942 RNF157Q96PX1 679 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 KLC2Q9H0B6 622 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 NOL6Q9H6R4 1146 aaKnown RBP16.22■□□□□ 0.19
TRA2A-208ENST00000490942 LZTFL1Q9NQ48 299 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 NDFIP2Q9NV92 336 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 HCN2Q9UL51 889 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 HS3ST2Q9Y278 367 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 HYOU1Q9Y4L1 999 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 RAD54BQ9Y620 910 aa16.22■□□□□ 0.19
TRA2A-208ENST00000490942 A0A0D9SEW6 157 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 DCNP07585 359 aaKnown RBP16.21■□□□□ 0.19
TRA2A-208ENST00000490942 CD48P09326 243 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 PTPN7P35236 360 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 GJC1P36383 396 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 NNMTP40261 264 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 CETN2P41208 172 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 PEX5P50542 639 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 RWDD2BP57060 319 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 ST8SIA6P61647 398 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 GAS6Q14393 721 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 PAFAH1B3Q15102 231 aaKnown RBP16.21■□□□□ 0.19
TRA2A-208ENST00000490942 HS1BP3Q53T59 392 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 C2orf27AQ580R0 203 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 EGFLAMQ63HQ2 1017 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 SLC9A4Q6AI14 798 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 Q6ZS52 159 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 SFTPA1Q8IWL2 248 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 REXO1L1PQ8IX06 675 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 CHPFQ8IZ52 775 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 CAMKK1Q8N5S9 505 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 DTWD2Q8NBA8 298 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 RPLP0P6Q8NHW5 317 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 PCDH19Q8TAB3 1148 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 HES6Q96HZ4 224 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 PSMB7Q99436 277 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 PRRX2Q99811 253 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 LRFN3Q9BTN0 628 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 TMEM245Q9H330 911 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 FBRSQ9HAH7 460 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 ATP13A1Q9HD20 1204 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 SLC25A13Q9UJS0 675 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 HPCAL4Q9UM19 191 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 SLC8A2Q9UPR5 921 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 ERVW-1Q9UQF0 538 aa16.21■□□□□ 0.19
TRA2A-208ENST00000490942 CHD5Q8TDI0 1954 aa16.2■□□□□ 0.18
TRA2A-208ENST00000490942 ARHGAP42A6NI28 874 aa16.2■□□□□ 0.18
TRA2A-208ENST00000490942 RASA4BC9J798 803 aa16.2■□□□□ 0.18
TRA2A-208ENST00000490942 RASA4O43374 803 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms