RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 SKOR1P84550 965 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 ENPEPQ07075 957 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 NFATC3Q12968 1075 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 NFIL3Q16649 462 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 AGBL4Q5VU57 503 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 ERICH6BQ5W0A0 696 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 LGI2Q8N0V4 545 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 EXD3Q8N9H8 876 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 TMEM145Q8NBT3 493 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 MAPK15Q8TD08 544 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 CLEC4CQ8WTT0 213 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 FRS2Q8WU20 508 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
USP48-210ENST00000489108 XPO7Q9UIA9 1087 aaKnown RBP16.69■□□□□ 0.26
USP48-210ENST00000489108 COL12A1Q99715 3063 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 KIF26BQ2KJY2 2108 aa16.69■□□□□ 0.26
USP48-210ENST00000489108 O00370 1275 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 ACTN4O43707 911 aaKnown RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 RNGTTO60942 597 aaKnown RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 MOCS2O96007 188 aaPredicted RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 SETSIPP0DME0 302 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 ALPPL2P10696 532 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 VDRP11473 427 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 PRLRP16471 622 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 TGM2P21980 687 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 DUSP3P51452 185 aaPredicted RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 TAS2R38P59533 333 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 ADAM9Q13443 819 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 FOXD4L6Q3SYB3 417 aaPredicted RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 FAM46CQ5VWP2 391 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 PMF1Q6P1K2 205 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 IGF2-ASQ6U949 168 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 FOXD4L3Q6VB84 417 aaPredicted RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 CCDC81Q6ZN84 652 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 IFI44Q8TCB0 444 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 SLC35F5Q8WV83 523 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 OR8D1Q8WZ84 308 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 IRGQQ8WZA9 623 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 ATXN7L3BQ96GX2 97 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 SLC39A13Q96H72 371 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 PRR11Q96HE9 360 aaPredicted RBP16.68■□□□□ 0.26
USP48-210ENST00000489108 FAM117AQ9C073 453 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 NLGN3Q9NZ94 848 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 MAPK8IP1Q9UQF2 711 aa16.68■□□□□ 0.26
USP48-210ENST00000489108 PTPN13Q12923 2485 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 K7ESM1 405 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 FYNP06241 537 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 CENPBP07199 599 aaPredicted RBP16.67■□□□□ 0.26
USP48-210ENST00000489108 PDGFRAP16234 1089 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 ME1P48163 572 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 MXI1P50539 228 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 MCCD1P59942 119 aaPredicted RBP16.67■□□□□ 0.26
USP48-210ENST00000489108 ACCSLQ4AC99 568 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 ZNF542PQ5EBM4 170 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 COLEC12Q5KU26 742 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 RAP1GAP2Q684P5 730 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 DSG4Q86SJ6 1040 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 OR13H1Q8NG92 308 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 DQX1Q8TE96 717 aaKnown RBP16.67■□□□□ 0.26
USP48-210ENST00000489108 CCDC97Q96F63 343 aaPredicted RBP16.67■□□□□ 0.26
USP48-210ENST00000489108 NOX5Q96PH1 765 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 CALN1Q9BXU9 219 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 FZD3Q9NPG1 666 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 PPM1HQ9ULR3 514 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 TLR6Q9Y2C9 796 aa16.67■□□□□ 0.26
USP48-210ENST00000489108 HEMK1Q9Y5R4 338 aaPredicted RBP16.67■□□□□ 0.26
USP48-210ENST00000489108 A0A1W2PQU0 124 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 PMS2P1A4D2B8 440 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 NEMP2A6NFY4 417 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 SCAMP1O15126 338 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 LZTS3O60299 673 aaPredicted RBP16.66■□□□□ 0.26
USP48-210ENST00000489108 NEBLO76041 1014 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 RPL13P26373 211 aaKnown RBP16.66■□□□□ 0.26
USP48-210ENST00000489108 CLDN2P57739 230 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 CUL2Q13617 745 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 ARL13BQ3SXY8 428 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 FOXD4L5Q5VV16 416 aaPredicted RBP16.66■□□□□ 0.26
USP48-210ENST00000489108 FOXR1Q6PIV2 292 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 LCLAT1Q6UWP7 414 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 COL27A1Q8IZC6 1860 aaPredicted RBP16.66■□□□□ 0.26
USP48-210ENST00000489108 FOXD4L4Q8WXT5 416 aaPredicted RBP16.66■□□□□ 0.26
USP48-210ENST00000489108 TFAP2BQ92481 460 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 INTS4Q96HW7 963 aaKnown RBP16.66■□□□□ 0.26
USP48-210ENST00000489108 MIS12Q9H081 205 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 USP29Q9HBJ7 922 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 PREBQ9HCU5 417 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 KIAA1257Q9ULG3 409 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 NAALADL1Q9UQQ1 740 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 ENTPD2Q9Y5L3 495 aa16.66■□□□□ 0.26
USP48-210ENST00000489108 CPED1A4D0V7 1026 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 CDRT15L2A8MXV6 281 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 C1QTNF3-AMACRE9PGA6 284 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 EFSO43281 561 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 ZNF18P17022 549 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 TACR2P21452 398 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 NUCB2P80303 420 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 SULT2A1Q06520 285 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 CLN3Q13286 438 aa16.65■□□□□ 0.26
USP48-210ENST00000489108 SLC12A1Q13621 1099 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms