RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 BNC1Q01954 994 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 ARL16Q0P5N6 197 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 CSHL1Q14406 222 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 FCN2Q15485 313 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 SLC5A9Q2M3M2 681 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 ZNF284Q2VY69 593 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 ARHGAP29Q52LW3 1261 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 MSANTD2Q6P1R3 559 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 TMEM71Q6P5X7 295 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 C9orf139Q6ZV77 190 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 MYPOPQ86VE0 399 aaPredicted RBP2.98□□□□□ -1.93
CCDC93-209ENST00000488908 WDSUB1Q8N9V3 476 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 SPATA20Q8TB22 786 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 SLC35F5Q8WV83 523 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 ZNF333Q96JL9 665 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 PGLYRP2Q96PD5 576 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 DUX3Q96PT4 197 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 PAAF1Q9BRP4 392 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 SLC25A33Q9BSK2 321 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 BTBD1Q9H0C5 482 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 PNPLA8Q9NP80 782 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 PRDM11Q9NQV5 511 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 GAB2Q9UQC2 676 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 RAP2CQ9Y3L5 183 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 PCDHAC2Q9Y5I4 1007 aa2.98□□□□□ -1.93
CCDC93-209ENST00000488908 IGKV3D-20A0A0C4DH25 116 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 MCIDASD6RGH6 385 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 NKX2-8O15522 239 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 ZG16O60844 167 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 ZBED1O96006 694 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 MYZAPP0CAP1 466 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 MYL4P12829 197 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 KLRC2P26717 231 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 C21orf33P30042 268 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 PPP3CCP48454 512 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 ADPRHP54922 357 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 DMP1Q13316 513 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 DAG1Q14118 895 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 ARL13AQ5H913 290 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 RAP1GAP2Q684P5 730 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 HEPHL1Q6MZM0 1159 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 MIGA1Q8NAN2 632 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 SLC22A17Q8WUG5 538 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 PCDHAC1Q9H158 963 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 GAREM1Q9H706 876 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 ACTR5Q9H9F9 607 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 MALT1Q9UDY8 824 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 AGO1Q9UL18 857 aaKnown RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 ZMYND8Q9ULU4 1186 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 RAI2Q9Y5P3 530 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 SNX13Q9Y5W8 968 aa2.97□□□□□ -1.93
CCDC93-209ENST00000488908 TP53BP1Q12888 1972 aaPredicted RBP2.97□□□□□ -1.93
CCDC93-209ENST00000488908 IGLV5-37A0A075B6J1 123 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 IGHV4-28A0A0C4DH34 117 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 A0A1B0GU03 582 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 TPP1O14773 563 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 CLGNO14967 610 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 APOHP02749 345 aaPredicted RBP2.96□□□□□ -1.94
CCDC93-209ENST00000488908 ITGA5P08648 1049 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 CFC1BP0CG36 223 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 CFC1P0CG37 223 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 SRGAP2BP0DMP2 458 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 THPOP40225 353 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 EPHB1P54762 984 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 TAS2R50P59544 299 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 TLE3Q04726 772 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 HDAC1Q13547 482 aaPredicted RBP2.96□□□□□ -1.94
CCDC93-209ENST00000488908 PLEKHO1Q53GL0 409 aaPredicted RBP2.96□□□□□ -1.94
CCDC93-209ENST00000488908 ARHGAP15Q53QZ3 475 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 TRMT1LQ7Z2T5 733 aaKnown RBP2.96□□□□□ -1.94
CCDC93-209ENST00000488908 DGLUCYQ7Z3D6 616 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 HORMAD2Q8N7B1 307 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 ATP11CQ8NB49 1132 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 TMEM163Q8TC26 289 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 FBXO17Q96EF6 278 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 BICD1Q96G01 975 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 SNX27Q96L92 541 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 GFM1Q96RP9 751 aaKnown RBP2.96□□□□□ -1.94
CCDC93-209ENST00000488908 BRINP2Q9C0B6 783 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 GFRA4Q9GZZ7 299 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 MMP28Q9H239 520 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 CADPSQ9ULU8 1353 aa2.96□□□□□ -1.94
CCDC93-209ENST00000488908 MAGEA13PA6NCF6 341 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 PRAC2D3DTV9 90 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 DHHO43323 396 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 ITM2AO43736 263 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 XPNPEP2O43895 674 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 PECAM1P16284 738 aaPredicted RBP2.95□□□□□ -1.94
CCDC93-209ENST00000488908 EGR1P18146 543 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 IBSPP21815 317 aaPredicted RBP2.95□□□□□ -1.94
CCDC93-209ENST00000488908 DGKAP23743 735 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 PEX5P50542 639 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 ATP12AP54707 1039 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 ST3GAL1Q11201 340 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 AAK1Q2M2I8 961 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 ANKRD40Q6AI12 368 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 MON1BQ7L1V2 547 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 ANKRD44Q8N8A2 993 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 SCRT2Q9NQ03 307 aa2.95□□□□□ -1.94
CCDC93-209ENST00000488908 TMEM248Q9NWD8 314 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms