RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 WNT16Q9UBV4 365 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 CA14Q9ULX7 337 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 PIAS3Q9Y6X2 628 aa19.9■□□□□ 0.78
CCM2-216ENST00000488727 F5H5T6 163 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 TYRP14679 529 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 HOXD9P28356 352 aaPredicted RBP19.89■□□□□ 0.77
CCM2-216ENST00000488727 CTHP32929 405 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 GAD2Q05329 585 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 NR1H3Q13133 447 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 MPPE1Q53F39 396 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 EFHC2Q5JST6 749 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 ERMARDQ5T6L9 678 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 CCDC105Q8IYK2 499 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 CFAP52Q8N1V2 620 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 SH2D3CQ8N5H7 860 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 DDI1Q8WTU0 396 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 OSBPL2Q9H1P3 480 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 ZWILCHQ9H900 591 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 OR12D3Q9UGF7 316 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 AP4E1Q9UPM8 1137 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 F5P12259 2224 aa19.89■□□□□ 0.77
CCM2-216ENST00000488727 KRBA1A5PL33 1030 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 SPECC1L-ADORA2AF8WAN1 911 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 EIF3HO15372 352 aaKnown RBP eCLIP19.88■□□□□ 0.77
CCM2-216ENST00000488727 DCXO43602 365 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 ECEL1O95672 775 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 NUDT17P0C025 328 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 NR1D1P20393 614 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 SSR1P43307 286 aaKnown RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 MANEALQ5VSG8 457 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 TXNDC11Q6PKC3 985 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 ETFBKMTQ8IXQ9 262 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 NAT16Q8N8M0 369 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 FBXO25Q8TCJ0 367 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 ARHGEF3Q9NR81 526 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 MTRF1LQ9UGC7 380 aaKnown RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 CLEC4EQ9ULY5 219 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 E9PAM4 449 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 TBL1XO60907 577 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 CYBBP04839 570 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 OPRD1P41143 372 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 NRG1Q02297 640 aaPredicted RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 SEMA3BQ13214 749 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 MLF2Q15773 248 aaPredicted RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 C5orf22Q49AR2 442 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 KCTD16Q68DU8 428 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 RNF43Q68DV7 783 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 CIR1Q86X95 450 aaPredicted RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 HJURPQ8NCD3 748 aaPredicted RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 ART4Q93070 314 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 RPRD1AQ96P16 312 aaPredicted RBP19.88■□□□□ 0.77
CCM2-216ENST00000488727 HOMER3Q9NSC5 361 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 FBXL21Q9UKT6 434 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 NEU3Q9UQ49 428 aa19.88■□□□□ 0.77
CCM2-216ENST00000488727 IGLV3-10A0A075B6K4 115 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 CACNG3O60359 315 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 LRIG2O94898 1065 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 PLTPP55058 493 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 GNGT1P63211 74 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 MESP2Q0VG99 397 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 KLF1Q13351 362 aaPredicted RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 ATP13A4Q4VNC1 1196 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 BOLA3Q53S33 107 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 MPP7Q5T2T1 576 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 ACBD5Q5T8D3 534 aaPredicted RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 TPRG1Q6ZUI0 275 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 RALGPS2Q86X27 583 aaPredicted RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 SIX5Q8N196 739 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 ARFGAP2Q8N6H7 521 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 EXD1Q8NHP7 514 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 EDAQ92838 391 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 COL25A1Q9BXS0 654 aaPredicted RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 EPB41L4BQ9H329 900 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 PABPC3Q9H361 631 aaKnown RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 DHX35Q9H5Z1 703 aaKnown RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 C8orf33Q9H7E9 229 aaPredicted RBP19.87■□□□□ 0.77
CCM2-216ENST00000488727 WHRNQ9P202 907 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 ATP8A1Q9Y2Q0 1164 aa19.87■□□□□ 0.77
CCM2-216ENST00000488727 TECTAO75443 2155 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 TRIM24O15164 1050 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 CD72P21854 359 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 GJC1P36383 396 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 SLC6A11P48066 632 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 PMS2P54278 862 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 HADHQ16836 314 aaKnown RBP19.86■□□□□ 0.77
CCM2-216ENST00000488727 PSTKQ8IV42 348 aaKnown RBP19.86■□□□□ 0.77
CCM2-216ENST00000488727 OR2W6PQ8NHA6 318 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 WFDC5Q8TCV5 224 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 GRK7Q8WTQ7 553 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 TEKT4Q8WW24 435 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 HSPH1Q92598 858 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 KCTD15Q96SI1 283 aaPredicted RBP19.86■□□□□ 0.77
CCM2-216ENST00000488727 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.86■□□□□ 0.77
CCM2-216ENST00000488727 MPP6Q9NZW5 540 aa19.86■□□□□ 0.77
CCM2-216ENST00000488727 SRRM3A6NNA2 597 aaPredicted RBP19.85■□□□□ 0.77
CCM2-216ENST00000488727 DRGXA6NNA5 263 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 TULP3O75386 442 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 CNTN5O94779 1100 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 GLULP15104 373 aa19.85■□□□□ 0.77
CCM2-216ENST00000488727 L1CAMP32004 1257 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms