RNA–Protein interactions for RNA: ENST00000486016.1

GCFC2-209, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-209ENST00000486016 GRK5P34947 590 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 STAT1P42224 750 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 HSPA7P48741 367 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 COMPP49747 757 aaPredicted RBP4.32□□□□□ -1.72
GCFC2-209ENST00000486016 ERVFC1-1P60608 527 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 ARL13AQ5H913 290 aaPredicted RBP4.32□□□□□ -1.72
GCFC2-209ENST00000486016 VWA5B1Q5TIE3 1220 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 OTUD1Q5VV17 481 aaPredicted RBP4.32□□□□□ -1.72
GCFC2-209ENST00000486016 IZUMO3Q5VZ72 239 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 C8orf82Q6P1X6 216 aaPredicted RBP4.32□□□□□ -1.72
GCFC2-209ENST00000486016 TMEM71Q6P5X7 295 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 AAGABQ6PD74 315 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 FBXO38Q6PIJ6 1188 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 KLBQ86Z14 1044 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 FAM217AQ8IXS0 508 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 TMEM217Q8N7C4 229 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 BICD2Q8TD16 824 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 RIPOR3Q96MK2 946 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 NPAS1Q99742 590 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 KLHL31Q9H511 634 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 KLHL42Q9P2K6 505 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 KCNG2Q9UJ96 466 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 PKP3Q9Y446 797 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 PCDHGB1Q9Y5G3 927 aa4.32□□□□□ -1.72
GCFC2-209ENST00000486016 SMTNL1A8MU46 457 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 KIF28PB7ZC32 967 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 SOX30O94993 753 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 CHRNA5P30532 468 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 SEC61A1P61619 476 aaKnown RBP4.31□□□□□ -1.72
GCFC2-209ENST00000486016 DSC1Q08554 894 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 TRAF3Q13114 568 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 HNF4GQ14541 408 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 TRIM60Q495X7 471 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 PLK5Q496M5 336 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 OR2C3Q8N628 320 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 NEXN-AS1Q8NBZ9 246 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 PJA1Q8NG27 643 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 WDR60Q8WVS4 1066 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 STK33Q9BYT3 514 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 CCDC134Q9H6E4 229 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 CATSPERBQ9H7T0 1116 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 ZDHHC7Q9NXF8 308 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 NFU1Q9UMS0 254 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 LZTS1Q9Y250 596 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 SLC4A4Q9Y6R1 1079 aa4.31□□□□□ -1.72
GCFC2-209ENST00000486016 FAM90A18PA6NE21 464 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 FAM90A16PA6NEW6 464 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 FAM90A9PA6NNJ1 464 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 SLC38A8A6NNN8 435 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 PRSS47A8MTI9 375 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 FAM90A5PA8MXJ8 464 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 ZNF432O94892 652 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 ZBTB11O95625 1053 aaPredicted RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 FAM90A15PP0C7V4 464 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 FAM90A14PP0C7W9 464 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 FCGR1AP12314 374 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 COASYQ13057 564 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 IZUMO4Q1ZYL8 232 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 TDRD12Q587J7 1177 aaKnown RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 RINT1Q6NUQ1 792 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 TMEM200AQ86VY9 491 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 CAMK1DQ8IU85 385 aa4.3□□□□□ -1.72
GCFC2-209ENST00000486016 CMASQ8NFW8 434 aaPredicted RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 IPO4Q8TEX9 1081 aaKnown RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 SORBS1Q9BX66 1292 aaKnown RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 TP63Q9H3D4 680 aaPredicted RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 DDX31Q9H8H2 851 aaKnown RBP4.3□□□□□ -1.72
GCFC2-209ENST00000486016 MS4A18H0YCH9 400 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 STMND1H3BQB6 276 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 KIF3BO15066 747 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 LDB2O43679 373 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 SPSB3Q6PJ21 355 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 SLC30A9Q6PML9 568 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 IGFN1Q86VF2 1251 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 CCDC25Q86WR0 208 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 TMPRSS12Q86WS5 348 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 NRSN1Q8IZ57 195 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 FAM185AQ8N0U4 392 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 WBP1Q96G27 269 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 APOLD1Q96LR9 279 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 IL25Q9H293 177 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 ACTR5Q9H9F9 607 aaPredicted RBP4.29□□□□□ -1.72
GCFC2-209ENST00000486016 SLC22A11Q9NSA0 550 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 SLC39A10Q9ULF5 831 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 ICAM5Q9UMF0 924 aa4.29□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3DA0A087WVF3 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3IA0A087WXS9 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3EA0A087X179 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3KA0A087X1G2 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TCRBV7S3A2A0A539 114 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3BA6NDS4 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3FA6NER0 549 aaPredicted RBP4.28□□□□□ -1.72
GCFC2-209ENST00000486016 MBD3L5A6NJ08 208 aaPredicted RBP4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3LB9A6J9 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 PIP5K1BO14986 540 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 DNPH1O43598 174 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 LIASO43766 372 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 PRSS2P07478 247 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 TBC1D3HP0C7X1 549 aa4.28□□□□□ -1.72
GCFC2-209ENST00000486016 UNGP13051 313 aaPredicted RBP4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms