RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 TAF6P49848 677 aa7□□□□□ -1.29
SMC4-217ENST00000485867 CCT8P50990 548 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TMPRSS3P57727 454 aa7□□□□□ -1.29
SMC4-217ENST00000485867 SLC7A9P82251 487 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TSPY1Q01534 308 aa7□□□□□ -1.29
SMC4-217ENST00000485867 STRN3Q13033 797 aa7□□□□□ -1.29
SMC4-217ENST00000485867 SF3A1Q15459 793 aaKnown RBP7□□□□□ -1.29
SMC4-217ENST00000485867 CCDC142Q17RM4 750 aa7□□□□□ -1.29
SMC4-217ENST00000485867 KIF19Q2TAC6 998 aa7□□□□□ -1.29
SMC4-217ENST00000485867 LCE5AQ5TCM9 118 aa7□□□□□ -1.29
SMC4-217ENST00000485867 ARHGAP40Q5TG30 622 aa7□□□□□ -1.29
SMC4-217ENST00000485867 GALNT18Q6P9A2 607 aa7□□□□□ -1.29
SMC4-217ENST00000485867 USP49Q70CQ1 688 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TMEM151BQ8IW70 566 aa7□□□□□ -1.29
SMC4-217ENST00000485867 CHPFQ8IZ52 775 aa7□□□□□ -1.29
SMC4-217ENST00000485867 NAT16Q8N8M0 369 aa7□□□□□ -1.29
SMC4-217ENST00000485867 ERMNQ8TAM6 284 aa7□□□□□ -1.29
SMC4-217ENST00000485867 TSPAN18Q96SJ8 248 aa7□□□□□ -1.29
SMC4-217ENST00000485867 LGMNQ99538 433 aa7□□□□□ -1.29
SMC4-217ENST00000485867 PKMYT1Q99640 499 aa7□□□□□ -1.29
SMC4-217ENST00000485867 GABRG3Q99928 467 aa7□□□□□ -1.29
SMC4-217ENST00000485867 MKRN2Q9H000 416 aaKnown RBP7□□□□□ -1.29
SMC4-217ENST00000485867 RPF1Q9H9Y2 349 aaKnown RBP7□□□□□ -1.29
SMC4-217ENST00000485867 SMPD4Q9NXE4 827 aa7□□□□□ -1.29
SMC4-217ENST00000485867 CFAP97Q9P2B7 532 aa7□□□□□ -1.29
SMC4-217ENST00000485867 ANKMY1Q9P2S6 941 aa7□□□□□ -1.29
SMC4-217ENST00000485867 DEC1Q9P2X7 70 aa7□□□□□ -1.29
SMC4-217ENST00000485867 EIF2B4Q9UI10 523 aaKnown RBP7□□□□□ -1.29
SMC4-217ENST00000485867 SLCO1B1Q9Y6L6 691 aa7□□□□□ -1.29
SMC4-217ENST00000485867 ICE1Q9Y2F5 2266 aa7□□□□□ -1.29
SMC4-217ENST00000485867 C2CD3Q4AC94 2353 aa7□□□□□ -1.29
SMC4-217ENST00000485867 E2F8A0AVK6 867 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 KCNJ18B7U540 433 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 H0Y8X5 98 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 CBX4O00257 560 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 PAPSS1O43252 624 aaPredicted RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 DTNBO60941 627 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 RFPL3O75679 317 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 OAS1P00973 400 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 ENDOUP21128 410 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 ADSSP30520 456 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 BUD31P41223 144 aaPredicted RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 CSNK1EP49674 416 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 ACADVLP49748 655 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 AFF3P51826 1226 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 UCNP55089 124 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 GAD2Q05329 585 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 STK3Q13188 491 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 AUHQ13825 339 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 PDIA5Q14554 519 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 TMEM132DQ14C87 1099 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 KYAT1Q16773 422 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 INAVAQ3KP66 663 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 CFAP221Q4G0U5 840 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 BROXQ5VW32 411 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 BTBD8Q5XKL5 378 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 SDE2Q6IQ49 451 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 SCN4BQ8IWT1 228 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 TMEM161BQ8NDZ6 487 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 SNRNP27Q8WVK2 155 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 NKD1Q969G9 470 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 IGSF8Q969P0 613 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 DACT3Q96B18 629 aaPredicted RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 ZNF274Q96GC6 653 aaPredicted RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 NAF1Q96HR8 494 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 EAF1Q96JC9 268 aaPredicted RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 NTPCRQ9BSD7 190 aaKnown RBP6.99□□□□□ -1.29
SMC4-217ENST00000485867 RNF38Q9H0F5 515 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 ZCCHC4Q9H5U6 513 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 C17orf75Q9HAS0 396 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 PRR13Q9NZ81 148 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 TRPM5Q9NZQ8 1165 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 TBC1D14Q9P2M4 693 aa6.99□□□□□ -1.29
SMC4-217ENST00000485867 CACNA1DQ01668 2161 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 ZNF840PA6NDX5 716 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 KCNK3O14649 394 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 OGTO15294 1046 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 C1SP09871 688 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 CDK4P11802 303 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 GP1BBP13224 206 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 ACAT1P24752 427 aaKnown RBP6.98□□□□□ -1.29
SMC4-217ENST00000485867 MCM7P33993 719 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 CCT6AP40227 531 aaKnown RBP6.98□□□□□ -1.29
SMC4-217ENST00000485867 IL9RQ01113 521 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 DNAJC3Q13217 504 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 FUT11Q495W5 492 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 SV2CQ496J9 727 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 HAUS3Q68CZ6 603 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 GRAMD4Q6IC98 578 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 CRTC3Q6UUV7 619 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 LAYNQ6UX15 382 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 DDX42Q86XP3 938 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC4-217ENST00000485867 CD302Q8IX05 232 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 PDCL2Q8N4E4 241 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 ZNF248Q8NDW4 579 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 OTUB2Q96DC9 234 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 FUBP3Q96I24 572 aaKnown RBP eCLIP6.98□□□□□ -1.29
SMC4-217ENST00000485867 HIC2Q96JB3 615 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 ACBD6Q9BR61 282 aa6.98□□□□□ -1.29
SMC4-217ENST00000485867 TTLL2Q9BWV7 592 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms