RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RSPO4Q2I0M5 234 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 CCDC122Q5T0U0 273 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 IL31Q6EBC2 164 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 PLEKHA7Q6IQ23 1121 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 ZNF683Q8IZ20 524 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 STK40Q8N2I9 435 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 OR52K2Q8NGK3 314 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 SNX19Q92543 992 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 NTAN1Q96AB6 310 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 HSPA12BQ96MM6 686 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 EPAS1Q99814 870 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 OMDQ99983 421 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 NUSAP1Q9BXS6 441 aaKnown RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 CD93Q9NPY3 652 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 WSB2Q9NYS7 404 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 USP36Q9P275 1121 aaKnown RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 PPARGC1AQ9UBK2 798 aaKnown RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 HPCAL4Q9UM19 191 aa12.84□□□□□ -0.35
PTCD1-205ENST00000485746 ZFHX2Q9C0A1 2572 aaPredicted RBP12.84□□□□□ -0.35
PTCD1-205ENST00000485746 ILVBLA1L0T0 632 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 CBX4O00257 560 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 PRPSAP2O60256 369 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 SNAP91O60641 907 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 CFIP05156 583 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 RHOQP17081 205 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 TGM1P22735 817 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ITPKAP23677 461 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ETFBP38117 255 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 PSMD8P48556 350 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 AIF1P55008 147 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 NRG1Q02297 640 aaPredicted RBP12.83□□□□□ -0.36
PTCD1-205ENST00000485746 DLG2Q15700 870 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 WDR45BQ5MNZ6 344 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 PPP1R15BQ5SWA1 713 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 C9orf64Q5T6V5 341 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 HGSNATQ68CP4 663 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ZNF783Q6ZMS7 281 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 DSG4Q86SJ6 1040 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 SYT12Q8IV01 421 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 OR7D4Q8NG98 312 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 OR8K1Q8NGG5 319 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 OR8D1Q8WZ84 308 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ALG14Q96F25 216 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 MYO19Q96H55 970 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 CCDC114Q96M63 670 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 MAGEB5Q9BZ81 275 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 BTBD1Q9H0C5 482 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ISCUQ9H1K1 167 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ATP13A1Q9HD20 1204 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 FBXL12Q9NXK8 326 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 PCSK1NQ9UHG2 260 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 DNAI1Q9UI46 699 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 FZD10Q9ULW2 581 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 SCML1Q9UN30 329 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 ATXN2Q99700 1313 aaKnown RBP12.83□□□□□ -0.36
PTCD1-205ENST00000485746 FANCMQ8IYD8 2048 aa12.83□□□□□ -0.36
PTCD1-205ENST00000485746 A0A0D9SEW6 157 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 TMEM191CA6NGB0 347 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 FAM47DPA6NHR8 397 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 FAM72CH0Y354 149 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 MID1O15344 667 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 DAPK3O43293 454 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 ATP9BO43861 1147 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 LRIG2O94898 1065 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 IL1BP01584 269 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 GNSP15586 552 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 EPHB2P29323 1055 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 L1CAMP32004 1257 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 SLC8A1P32418 973 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 EIF4A3P38919 411 aaKnown RBP12.82□□□□□ -0.36
PTCD1-205ENST00000485746 RECQLP46063 649 aaPredicted RBP12.82□□□□□ -0.36
PTCD1-205ENST00000485746 MAPKAPK2P49137 400 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 DNA2P51530 1060 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 OGDHQ02218 1023 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 GNA12Q03113 381 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 ARID5BQ14865 1188 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 CST6Q15828 149 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 DUOXA1Q1HG43 343 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 TRIM61Q5EBN2 209 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 PLA2G2CQ5R387 149 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 FAM72AQ5TYM5 149 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 TCEAL6Q6IPX3 200 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 FAM72DQ6L9T8 149 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 RETSATQ6NUM9 610 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 ALKBH5Q6P6C2 394 aaKnown RBP12.82□□□□□ -0.36
PTCD1-205ENST00000485746 RABEPKQ7Z6M1 372 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 FAM72BQ86X60 149 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 VSTM4Q8IW00 320 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 PYROXD2Q8N2H3 581 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 DCAF4L2Q8NA75 395 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 CEP76Q8TAP6 659 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 NETO1Q8TDF5 533 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 PTPRN2Q92932 1015 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 TCEAL3Q969E4 200 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 PSMB7Q99436 277 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 NCAPGQ9BPX3 1015 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 MIR1-1HGQ9H1L0 117 aa12.82□□□□□ -0.36
PTCD1-205ENST00000485746 RSPH9Q9H1X1 276 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms