RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 SFSWAPQ12872 951 aaKnown RBP13.29□□□□□ -0.28
UBR4-213ENST00000483922 CDH18Q13634 790 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 ELAVL3Q14576 367 aaKnown RBP13.29□□□□□ -0.28
UBR4-213ENST00000483922 ATL3Q6DD88 541 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 TMC6Q7Z403 805 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 TRIM69Q86WT6 500 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 OXR1Q8N573 874 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 ZNF557Q8N988 423 aaPredicted RBP13.29□□□□□ -0.28
UBR4-213ENST00000483922 ZNF248Q8NDW4 579 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 LMO3Q8TAP4 145 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 KLK6Q92876 244 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 SLC35C1Q96A29 364 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 KDM4CQ9H3R0 1056 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 ASCL3Q9NQ33 180 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 CFAP45Q9UL16 551 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 OR51B4Q9Y5P0 310 aa13.29□□□□□ -0.28
UBR4-213ENST00000483922 PMS2P1A4D2B8 440 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 DXOO77932 396 aaKnown RBP13.28□□□□□ -0.28
UBR4-213ENST00000483922 CTSLP07711 333 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 PAEPP09466 180 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 PDGFRAP16234 1089 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 PRCPP42785 496 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 GPD2P43304 727 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 SYKP43405 635 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 E2F1Q01094 437 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 KCNMA1Q12791 1236 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 STAT4Q14765 748 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 TAF5Q15542 800 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 SLC45A4Q5BKX6 768 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 ANKRD40Q6AI12 368 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 TMEM270Q6UE05 265 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 KRBA2Q6ZNG9 492 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 CCAR2Q8N163 923 aaKnown RBP13.28□□□□□ -0.28
UBR4-213ENST00000483922 OR4C6Q8NH72 309 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 SNRNP27Q8WVK2 155 aaKnown RBP13.28□□□□□ -0.28
UBR4-213ENST00000483922 WBP1Q96G27 269 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 KLHDC7BQ96G42 594 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 PRR11Q96HE9 360 aaPredicted RBP13.28□□□□□ -0.28
UBR4-213ENST00000483922 HSFY1Q96LI6 401 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 ZNF578Q96N58 590 aaPredicted RBP13.28□□□□□ -0.28
UBR4-213ENST00000483922 SPAG5Q96R06 1193 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 LGMNQ99538 433 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 MYOCQ99972 504 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.28□□□□□ -0.28
UBR4-213ENST00000483922 OSBPL2Q9H1P3 480 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 ZDHHC9Q9Y397 364 aa13.28□□□□□ -0.28
UBR4-213ENST00000483922 KCNU1A8MYU2 1149 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 PRAMEF26H0Y7S4 382 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 M0QYV0 167 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 CETN3O15182 167 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 SLC31A1O15431 190 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 FFAR2O15552 330 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 ATP9BO43861 1147 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 STX10O60499 249 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 USP12O75317 370 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 THEGLP0DJG4 465 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 CKMT1AP12532 417 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 PRLRP16471 622 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 LSSP48449 732 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 GABREP78334 506 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 OVGP1Q12889 678 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 TAF1BQ53T94 588 aaPredicted RBP13.27□□□□□ -0.29
UBR4-213ENST00000483922 ZNF542PQ5EBM4 170 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 DCAF17Q5H9S7 520 aaPredicted RBP13.27□□□□□ -0.29
UBR4-213ENST00000483922 PIP5KL1Q5T9C9 394 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 TCERG1LQ5VWI1 586 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 SLC22A18ASQ8N1D0 253 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 OR13H1Q8NG92 308 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 BMFQ96LC9 184 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 APOLD1Q96LR9 279 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 SERPINB11Q96P15 392 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 DDX50Q9BQ39 737 aaKnown RBP13.27□□□□□ -0.29
UBR4-213ENST00000483922 FZD3Q9NPG1 666 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 KLHL11Q9NVR0 708 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 TJP2Q9UDY2 1190 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 TPX2Q9ULW0 747 aaKnown RBP13.27□□□□□ -0.29
UBR4-213ENST00000483922 ZFR2Q9UPR6 939 aaKnown RBP13.27□□□□□ -0.29
UBR4-213ENST00000483922 DMTF1Q9Y222 760 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 CEP83Q9Y592 693 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.29
UBR4-213ENST00000483922 B8ZZF3 427 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 MCF2LO15068 1137 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 SLC7A4O43246 635 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 RNGTTO60942 597 aaKnown RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 CSO75390 466 aaKnown RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 NEBLO76041 1014 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 MOCS3O95396 460 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 MT-CO1P00395 513 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 EPB41P11171 864 aaKnown RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 VASPP50552 380 aaPredicted RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 PCBP4P57723 403 aaKnown RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 CLDN2P57739 230 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 SKOR1P84550 965 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 C1QBPQ07021 282 aaKnown RBP13.26□□□□□ -0.29
UBR4-213ENST00000483922 NNTQ13423 1086 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 DLG2Q15700 870 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 ZNF284Q2VY69 593 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 Q6ZVU0 165 aa13.26□□□□□ -0.29
UBR4-213ENST00000483922 ARHGEF19Q8IW93 802 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms