RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 C2CD6Q53TS8 623 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 RNF219Q5W0B1 726 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-221ENST00000483778 GATAD2AQ86YP4 633 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 FAM71AQ8IYT1 594 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 OR14C36Q8NHC7 312 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 FAM81BQ96LP2 452 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 RPRD1AQ96P16 312 aaPredicted RBP18.55■□□□□ 0.56
ATG4B-221ENST00000483778 ITPR1Q14643 2758 aa18.55■□□□□ 0.56
ATG4B-221ENST00000483778 A0A1B0GVM2 712 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 TCAF2A6NFQ2 919 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 CBX4O00257 560 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 RTN2O75298 545 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 DAB1O75553 588 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 MT-CO1P00395 513 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 SLC2A3P11169 496 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 HOXB3P14651 431 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-221ENST00000483778 C5AR1P21730 350 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 KRT9P35527 623 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 SLC12A1Q13621 1099 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 DRAP1Q14919 205 aaPredicted RBP18.54■□□□□ 0.56
ATG4B-221ENST00000483778 MAN2A1Q16706 1144 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 ALFQ53S48 1182 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 TRNP1Q6NT89 227 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 SLC26A9Q7LBE3 791 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 ADAT2Q7Z6V5 191 aaKnown RBP18.54■□□□□ 0.56
ATG4B-221ENST00000483778 ZNF683Q8IZ20 524 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 NPY6RQ99463 290 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 CDC6Q99741 560 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 NDST4Q9H3R1 872 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 CLSTN2Q9H4D0 955 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 FZD4Q9ULV1 537 aa18.54■□□□□ 0.56
ATG4B-221ENST00000483778 URB1O60287 2271 aaKnown RBP18.54■□□□□ 0.56
ATG4B-221ENST00000483778 A0A1B0GTQ1 180 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 LRRC72A6NJI9 287 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 K7ERQ8 282 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 PCDHGA12O60330 932 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 NOS2P35228 1153 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 CCR5P51681 352 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 DLG2Q15700 870 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 TPD52L1Q16890 204 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-221ENST00000483778 C5orf22Q49AR2 442 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 ACCSLQ4AC99 568 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 VWA3BQ502W6 1294 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 CCDC157Q569K6 752 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 RABGAP1LQ5R372 815 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 SND1Q7KZF4 910 aaKnown RBP eCLIP18.53■□□□□ 0.56
ATG4B-221ENST00000483778 ZNF397Q8NF99 534 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-221ENST00000483778 MDM1Q8TC05 714 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 PSMB7Q99436 277 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 TUBGCP2Q9BSJ2 902 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 ACE2Q9BYF1 805 aaPredicted RBP18.53■□□□□ 0.56
ATG4B-221ENST00000483778 CAAP1Q9H8G2 361 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 AASDHPPTQ9NRN7 309 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 SAMSN1Q9NSI8 373 aaKnown RBP18.53■□□□□ 0.56
ATG4B-221ENST00000483778 ARHGAP20Q9P2F6 1191 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 FHOD1Q9Y613 1164 aa18.53■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3DA0A087WVF3 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3IA0A087WXS9 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3EA0A087X179 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3KA0A087X1G2 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-221ENST00000483778 FAM149AA5PLN7 773 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3FA6NER0 549 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3LB9A6J9 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 ATP9BO43861 1147 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 SNAP91O60641 907 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 ADH1BP00325 375 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3HP0C7X1 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 CD38P28907 300 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 CXCR3P49682 368 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 CCT8P50990 548 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 C21orf59P57076 290 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 CNTN1Q12860 1018 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 ZNF177Q13360 481 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-221ENST00000483778 ELAVL3Q14576 367 aaKnown RBP18.52■□□□□ 0.56
ATG4B-221ENST00000483778 SUZ12Q15022 739 aaKnown RBP18.52■□□□□ 0.56
ATG4B-221ENST00000483778 RAB6CQ53S08 254 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 KLHDC7AQ5VTJ3 777 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TAF3Q5VWG9 929 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3GQ6DHY5 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3CQ6IPX1 549 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 Q6ZVU0 165 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TMPRSS7Q7RTY8 843 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 PROSER1Q86XN7 944 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D3Q8IZP1 549 aaPredicted RBP18.52■□□□□ 0.56
ATG4B-221ENST00000483778 NT5C3BQ969T7 300 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 FAM131CQ96AQ9 280 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 SERAC1Q96JX3 654 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBCBQ99426 244 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 RAB6CQ9H0N0 254 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 ARHGEF38Q9NXL2 777 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 PPM1HQ9ULR3 514 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TBC1D30Q9Y2I9 924 aa18.52■□□□□ 0.56
ATG4B-221ENST00000483778 TRPM6Q9BX84 2022 aa18.52■□□□□ 0.55
ATG4B-221ENST00000483778 TNFSF14O43557 240 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 LATO43561 262 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 PRKCSHP14314 528 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 MAT2AP31153 395 aaKnown RBP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 NNMTP40261 264 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 GRK6P43250 576 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms