RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 SART1O43290 800 aaKnown RBP14.33□□□□□ -0.12
VARS-226ENST00000483275 DFNA5O60443 496 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 JUPP14923 745 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 GNA15P30679 374 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 USP8P40818 1118 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 YWHAZP63104 245 aaKnown RBP14.33□□□□□ -0.12
VARS-226ENST00000483275 CNTN1Q12860 1018 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 TARDBPQ13148 414 aaKnown RBP eCLIP14.33□□□□□ -0.12
VARS-226ENST00000483275 PDCLQ13371 301 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 ACCSLQ4AC99 568 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 NAPEPLDQ6IQ20 393 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 TMPRSS12Q86WS5 348 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 KDM1BQ8NB78 822 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 KLK6Q92876 244 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 NXPE2Q96DL1 559 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 PRMT1Q99873 361 aaKnown RBP14.33□□□□□ -0.12
VARS-226ENST00000483275 POPDC2Q9HBU9 364 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 UBE2TQ9NPD8 197 aaPredicted RBP14.33□□□□□ -0.12
VARS-226ENST00000483275 DDIT4Q9NX09 232 aa14.33□□□□□ -0.12
VARS-226ENST00000483275 BECN2A8MW95 431 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 LATO43561 262 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 AFPP02771 609 aaKnown RBP14.32□□□□□ -0.12
VARS-226ENST00000483275 PRLRP16471 622 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 HNF1BP35680 557 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 ABCG1P45844 678 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 ACADSBP45954 432 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 ARRB1P49407 418 aaPredicted RBP14.32□□□□□ -0.12
VARS-226ENST00000483275 CETN1Q12798 172 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 AGBL4Q5VU57 503 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 SFMBT2Q5VUG0 894 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 FBXL22Q6P050 247 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 KANSL1Q7Z3B3 1105 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 DEFB106AQ8N104 65 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 ZNF606Q8WXB4 792 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 RNF34Q969K3 372 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 SKA1Q96BD8 255 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 RPRD1AQ96P16 312 aaPredicted RBP14.32□□□□□ -0.12
VARS-226ENST00000483275 CPXM1Q96SM3 734 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 FZD3Q9NPG1 666 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 ARHGAP20Q9P2F6 1191 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 VANGL2Q9ULK5 521 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 CNTN6Q9UQ52 1028 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 SNX10Q9Y5X0 201 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 AK5Q9Y6K8 562 aa14.32□□□□□ -0.12
VARS-226ENST00000483275 FLNBO75369 2602 aaKnown RBP14.32□□□□□ -0.12
VARS-226ENST00000483275 A0A1B0GVM2 712 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 TCAF2A6NFQ2 919 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 RNF103O00237 685 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 P4HA2O15460 535 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 PNMA6AP0CW24 399 aaPredicted RBP14.31□□□□□ -0.12
VARS-226ENST00000483275 SFSWAPQ12872 951 aaKnown RBP14.31□□□□□ -0.12
VARS-226ENST00000483275 NME3Q13232 169 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 ARHGAP44Q17R89 818 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 RABGAP1LQ5R372 815 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 C6orf118Q5T5N4 469 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 FBXL19Q6PCT2 694 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 FAM183BPQ6ZVS7 135 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 C14orf80Q86SX3 495 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 ATP6V0D2Q8N8Y2 350 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 OR8D1Q8WZ84 308 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 TSC1Q92574 1164 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 ALG14Q96F25 216 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 SPAG5Q96R06 1193 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 THAP9Q9H5L6 903 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 PLCB1Q9NQ66 1216 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 AJAP1Q9UKB5 411 aaPredicted RBP14.31□□□□□ -0.12
VARS-226ENST00000483275 PCDHGA1Q9Y5H4 931 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.31□□□□□ -0.12
VARS-226ENST00000483275 RAI2Q9Y5P3 530 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 ZNF462Q96JM2 2506 aa14.31□□□□□ -0.12
VARS-226ENST00000483275 EIF4E1BA6NMX2 242 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 K7ERQ8 282 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 TRIM38O00635 465 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 FFAR2O15552 330 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 PLRG1O43660 514 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 SNAP91O60641 907 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 MT-CO1P00395 513 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 ERBB2P04626 1255 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 CTSLP07711 333 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 MYF5P13349 255 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 TFE3P19532 575 aaPredicted RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 NNMTP40261 264 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 EIF2S3P41091 472 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 TAS2R38P59533 333 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 EIF4EBP2Q13542 120 aaPredicted RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 AUHQ13825 339 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 MORC3Q14149 939 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 DLG2Q15700 870 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 SLC45A4Q5BKX6 768 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 OTUD1Q5VV17 481 aaPredicted RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 BEND5Q7L4P6 421 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 TMEM110Q86TL2 294 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 CREBRFQ8IUR6 639 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 WDTC1Q8N5D0 677 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 C1orf131Q8NDD1 294 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 SLC2A13Q96QE2 648 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 FEM1AQ9BSK4 669 aa14.3□□□□□ -0.12
VARS-226ENST00000483275 SRRTQ9BXP5 876 aaKnown RBP14.3□□□□□ -0.12
VARS-226ENST00000483275 ANLNQ9NQW6 1124 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms