RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 IRAK4Q9NWZ3 460 aa9.52□□□□□ -0.89
CUL3-209ENST00000481135 HMGB1P1B2RPK0 211 aaPredicted RBP9.51□□□□□ -0.89
CUL3-209ENST00000481135 TSPAN4O14817 238 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 MSI1O43347 362 aaKnown RBP9.51□□□□□ -0.89
CUL3-209ENST00000481135 GJC1P36383 396 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 PAFAH1B1P43034 410 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 CAMK1Q14012 370 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 GALNT3Q14435 633 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 NAA25Q14CX7 972 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 ARL13AQ5H913 290 aaPredicted RBP9.51□□□□□ -0.89
CUL3-209ENST00000481135 LRIG3Q6UXM1 1119 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 RNF144BQ7Z419 303 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 APOPT1Q96IL0 206 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 FUZQ9BT04 418 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 SEMA4CQ9C0C4 833 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
CUL3-209ENST00000481135 PNMA2Q9UL42 364 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 DHDHQ9UQ10 334 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 CYP46A1Q9Y6A2 500 aa9.51□□□□□ -0.89
CUL3-209ENST00000481135 GOLGA6L10A0A0M3HER8 536 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 DPPA5A6NC42 116 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 CHRNA5P30532 468 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 PROK1P58294 105 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 GALNT2Q10471 571 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 STIM1Q13586 685 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 SEMA3AQ14563 771 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 MEX3CQ5U5Q3 659 aaKnown RBP9.5□□□□□ -0.89
CUL3-209ENST00000481135 ACAD10Q6JQN1 1059 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 GJB7Q6PEY0 223 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 ZNF782Q6ZMW2 699 aaPredicted RBP9.5□□□□□ -0.89
CUL3-209ENST00000481135 CYB5R4Q7L1T6 521 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 TNIP2Q8NFZ5 429 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 ZG16BQ96DA0 208 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.5□□□□□ -0.89
CUL3-209ENST00000481135 PPP1R14DQ9NXH3 145 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 OSGIN2Q9Y236 505 aa9.5□□□□□ -0.89
CUL3-209ENST00000481135 SLC22A23A1A5C7 686 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 FAM90A7PA6NKC0 464 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 FAM90A22PA8MWA6 464 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 FAM90A12PA8MX19 464 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 FAM90A23PA8MXZ1 464 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 TNFAIP3P21580 790 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 TYK2P29597 1187 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 SKIV2L2P42285 1042 aaKnown RBP9.49□□□□□ -0.89
CUL3-209ENST00000481135 NR1H2P55055 460 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 RHAGQ02094 409 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 GHRHRQ02643 423 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 IL13RA2Q14627 380 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 MAPRE1Q15691 268 aaKnown RBP9.49□□□□□ -0.89
CUL3-209ENST00000481135 AP5B1Q2VPB7 878 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 SLC9C1Q4G0N8 1177 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 EARS2Q5JPH6 523 aaKnown RBP9.49□□□□□ -0.89
CUL3-209ENST00000481135 SLC9C2Q5TAH2 1124 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 VWA5B1Q5TIE3 1220 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 UBE2Q1Q7Z7E8 422 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 ADGRF4Q8IZF3 695 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 GALNT16Q8N428 558 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 ARL14EPQ8N8R7 260 aaPredicted RBP9.49□□□□□ -0.89
CUL3-209ENST00000481135 PHF7Q9BWX1 381 aaPredicted RBP9.49□□□□□ -0.89
CUL3-209ENST00000481135 FBXO4Q9UKT5 387 aa9.49□□□□□ -0.89
CUL3-209ENST00000481135 CYP2J2P51589 502 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 C5orf22Q49AR2 442 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 SH2D4BQ5SQS7 431 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 LCE1DQ5T752 114 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 FAM171A1Q5VUB5 890 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 PRIMA1Q86XR5 153 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 ARMC8Q8IUR7 673 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.48□□□□□ -0.89
CUL3-209ENST00000481135 ZUFSPQ96AP4 578 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 IFT27Q9BW83 186 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 IL21RQ9HBE5 538 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 VEZTQ9HBM0 779 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 Q9N2J8 555 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 MLXIPLQ9NP71 852 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 BEX4Q9NWD9 120 aaPredicted RBP9.48□□□□□ -0.89
CUL3-209ENST00000481135 UPB1Q9UBR1 384 aa9.48□□□□□ -0.89
CUL3-209ENST00000481135 ZNF335Q9H4Z2 1342 aaPredicted RBP9.48□□□□□ -0.89
CUL3-209ENST00000481135 PPP6CO00743 305 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 LCKP06239 509 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 ATP1A3P13637 1013 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 CASP6P55212 293 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 CDH15P55291 814 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 PLK5Q496M5 336 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 SLC22A25Q6T423 547 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 RFFLQ8WZ73 363 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 IP6K1Q92551 441 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 CNOT9Q92600 299 aaKnown RBP9.47□□□□□ -0.89
CUL3-209ENST00000481135 HDAC2Q92769 488 aaKnown RBP9.47□□□□□ -0.89
CUL3-209ENST00000481135 AGXT2Q9BYV1 514 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 MOV10Q9HCE1 1003 aaKnown RBP9.47□□□□□ -0.89
CUL3-209ENST00000481135 FLRT1Q9NZU1 646 aa9.47□□□□□ -0.89
CUL3-209ENST00000481135 KRTAP4-8A0A0G2JLE6 195 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 TCRBV7S3A2A0A539 114 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 GAGE10A6NGK3 116 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 C2CD4BA6NLJ0 364 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 LATS1O95835 1130 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 CHRM4P08173 479 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 FCGR2AP12318 317 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 MTNR1AP48039 350 aa9.46□□□□□ -0.9
CUL3-209ENST00000481135 GEMIN4P57678 1058 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms