RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 ZNF683Q8IZ20 524 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 TBC1D3Q8IZP1 549 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-212ENST00000480836 SHC3Q92529 594 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 TSC1Q92574 1164 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 SERAC1Q96JX3 654 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 PSMB7Q99436 277 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 AASDHPPTQ9NRN7 309 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.7□□□□□ -0.22
PTPN7-212ENST00000480836 DKK4Q9UBT3 224 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 VANGL2Q9ULK5 521 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 PPM1HQ9ULR3 514 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 HS3ST4Q9Y661 456 aa13.7□□□□□ -0.22
PTPN7-212ENST00000480836 ANKRD11Q6UB99 2663 aaPredicted RBP13.7□□□□□ -0.22
PTPN7-212ENST00000480836 LRRC72A6NJI9 287 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 F5H5T6 163 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 TLR4O00206 839 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 FOXN3O00409 490 aaPredicted RBP13.69□□□□□ -0.22
PTPN7-212ENST00000480836 SNAP91O60641 907 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 PAGE1O75459 146 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 ADCY5O95622 1261 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 APOEP02649 317 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 USP8P40818 1118 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 C21orf59P57076 290 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 CETN1Q12798 172 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 PTPN20Q4JDL3 420 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 RAB6CQ53S08 254 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 AGBL4Q5VU57 503 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 TRNP1Q6NT89 227 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 OLFML1Q6UWY5 402 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 C1orf131Q8NDD1 294 aaKnown RBP13.69□□□□□ -0.22
PTPN7-212ENST00000480836 KLK6Q92876 244 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 LRIG1Q96JA1 1093 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 PPP1R13BQ96KQ4 1090 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 RAB6CQ9H0N0 254 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 DDIT4Q9NX09 232 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 CEP83Q9Y592 693 aa13.69□□□□□ -0.22
PTPN7-212ENST00000480836 BICDL2A1A5D9 508 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ENC1O14682 589 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 SART1O43290 800 aaKnown RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 SMAD6O43541 496 aaKnown RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 TLX3O43711 291 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ATP9BO43861 1147 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 RNASEH1O60930 286 aaKnown RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 GLDCP23378 1020 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ITPKBP27987 946 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 EPHA8P29322 1005 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ACADVLP49748 655 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 NUCB2P80303 420 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 DLG2Q15700 870 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 CAMK4Q16566 473 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 MEA1Q16626 185 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 C5orf22Q49AR2 442 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 C2CD6Q53TS8 623 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 SFMBT2Q5VUG0 894 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 Q6ZVU0 165 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 SLC47A2Q86VL8 602 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 CREBRFQ8IUR6 639 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 SLC25A45Q8N413 288 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ATP6V0D2Q8N8Y2 350 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 CNDP2Q96KP4 475 aaKnown RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 RPRD1AQ96P16 312 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 FAM204AQ9H8W3 233 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 PIGVQ9NUD9 493 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 FTSJ1Q9UET6 329 aa13.68□□□□□ -0.22
PTPN7-212ENST00000480836 COL5A1P20908 1838 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-212ENST00000480836 ACACAQ13085 2346 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 MYLKQ15746 1914 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 A0A0D9SEW6 157 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 A0A1B0GVM2 712 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 TYW5A2RUC4 315 aaKnown RBP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 TCAF2A6NFQ2 919 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 TRIM38O00635 465 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 MCF2LO15068 1137 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 MED7O43513 233 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 PLRG1O43660 514 aaKnown RBP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 SDC3O75056 442 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 ZNF821O75541 412 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 MOCS3O95396 460 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 LDOC1O95751 146 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 GNA14O95837 355 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 ADH1BP00325 375 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 ITGAVP06756 1048 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 GIMD1P0DJR0 217 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 SRCP12931 536 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 MYF5P13349 255 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 PPP1R2P41236 205 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 RXRGP48443 463 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 CDK17Q00537 523 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 KCNMA1Q12791 1236 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 TARDBPQ13148 414 aaKnown RBP eCLIP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 NME3Q13232 169 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 ELAVL3Q14576 367 aaKnown RBP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 ACCSLQ4AC99 568 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 PIP5KL1Q5T9C9 394 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 RNF219Q5W0B1 726 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-212ENST00000480836 OR6B2Q6IFH4 312 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 FBXL19Q6PCT2 694 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 SH2D3CQ8N5H7 860 aa13.67□□□□□ -0.22
PTPN7-212ENST00000480836 CHST14Q8NCH0 376 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms