RNA–Protein interactions for RNA: ENST00000480024.1

FN1-220, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-220ENST00000480024 FZD4Q9ULV1 537 aa6.88□□□□□ -1.31
FN1-220ENST00000480024 PCDHGC3Q9UN70 934 aa6.88□□□□□ -1.31
FN1-220ENST00000480024 HS3ST4Q9Y661 456 aa6.88□□□□□ -1.31
FN1-220ENST00000480024 ARID1BQ8NFD5 2236 aaPredicted RBP6.88□□□□□ -1.31
FN1-220ENST00000480024 URB1O60287 2271 aaKnown RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3DA0A087WVF3 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3IA0A087WXS9 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3EA0A087X179 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3KA0A087X1G2 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 A0A1B0GTQ1 180 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 GTPBP10A4D1E9 387 aaKnown RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 FAM149AA5PLN7 773 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3FA6NER0 549 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3LB9A6J9 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 M0QYT0 321 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 CBX4O00257 560 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TAF4O00268 1085 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 PES1O00541 588 aaKnown RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 TNFSF14O43557 240 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 PCDHGA12O60330 932 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 PAGE1O75459 146 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3HP0C7X1 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 PRKCSHP14314 528 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 GOT1P17174 413 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TFE3P19532 575 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 C5AR1P21730 350 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 MAT2AP31153 395 aaKnown RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 DRD3P35462 400 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 CLCN1P35523 988 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 SULT1E1P49888 294 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 OXCT1P55809 520 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 RNASE9P60153 205 aaKnown RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 SLC6A3Q01959 620 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 SULT2A1Q06520 285 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 ZNF177Q13360 481 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 EIF4EBP2Q13542 120 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 SLC12A1Q13621 1099 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 DPCR1Q3MIW9 517 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 FAM102AQ5T9C2 384 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 TAF3Q5VWG9 929 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3GQ6DHY5 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3CQ6IPX1 549 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 CCNI2Q6ZMN8 369 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 DBX2Q6ZNG2 339 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 SND1Q7KZF4 910 aaKnown RBP eCLIP6.87□□□□□ -1.313e-7■■■□□ 15.6
FN1-220ENST00000480024 DSG4Q86SJ6 1040 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 C14orf80Q86SX3 495 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 PROSER1Q86XN7 944 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 FAM114A1Q8IWE2 563 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 TBC1D3Q8IZP1 549 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 MLKLQ8NB16 471 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 MDM1Q8TC05 714 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 FRS2Q8WU20 508 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 SERAC1Q96JX3 654 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 ELF4Q99607 663 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 SIK2Q9H0K1 926 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 MUC3BQ9H195 1237 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 PDCL3Q9H2J4 239 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 NDST4Q9H3R1 872 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 CLSTN2Q9H4D0 955 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 CCDC86Q9H6F5 360 aaKnown RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 PIGVQ9NUD9 493 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 LHX6Q9UPM6 363 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 SNX10Q9Y5X0 201 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 FHOD1Q9Y613 1164 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 DOCK4Q8N1I0 1966 aa6.87□□□□□ -1.31
FN1-220ENST00000480024 COL5A1P20908 1838 aaPredicted RBP6.87□□□□□ -1.31
FN1-220ENST00000480024 ADAMTS20P59510 1910 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 A0A1W2PR77 199 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 C1QTNF3-AMACRE9PGA6 284 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 GOLGA8SH3BPF8 625 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 FOXN3O00409 490 aaPredicted RBP6.86□□□□□ -1.31
FN1-220ENST00000480024 LATO43561 262 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 DFNA5O60443 496 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 SNAP91O60641 907 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CLDN11O75508 207 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CNTN5O94779 1100 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 DKK1O94907 266 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 ADCY5O95622 1261 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CAPNS1P04632 268 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 ITGAVP06756 1048 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 RHOCP08134 193 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 ZNF18P17022 549 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CD38P28907 300 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 EPHA8P29322 1005 aaPredicted RBP6.86□□□□□ -1.31
FN1-220ENST00000480024 NOS2P35228 1153 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CCR5P51681 352 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 PLK1P53350 603 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CLDN6P56747 220 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 SNX16P57768 344 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 NXPH1P58417 271 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 DEUP1Q05D60 604 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 CNTN1Q12860 1018 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 DRAP1Q14919 205 aaPredicted RBP6.86□□□□□ -1.31
FN1-220ENST00000480024 SHBQ15464 509 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 DLG2Q15700 870 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 VWA3BQ502W6 1294 aa6.86□□□□□ -1.31
FN1-220ENST00000480024 ALFQ53S48 1182 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms