RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 KRT7P08729 469 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 DLDP09622 509 aaKnown RBP27.49■■□□□ 1.99
CCM2-211ENST00000478582 NTSR1P30989 418 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 SSR1P43307 286 aaKnown RBP27.49■■□□□ 1.99
CCM2-211ENST00000478582 TPI1P60174 286 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 SMTNL2Q2TAL5 461 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 EOGTQ5NDL2 527 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 RNF219Q5W0B1 726 aaPredicted RBP27.49■■□□□ 1.99
CCM2-211ENST00000478582 POLNQ7Z5Q5 900 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 DCLK2Q8N568 766 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 TXNDC5Q8NBS9 432 aaKnown RBP27.49■■□□□ 1.99
CCM2-211ENST00000478582 FAM71BQ8TC56 605 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 NCDNQ9UBB6 729 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 RAB23Q9ULC3 237 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 DUSP10Q9Y6W6 482 aa27.49■■□□□ 1.99
CCM2-211ENST00000478582 EP300Q09472 2414 aaPredicted RBP27.49■■□□□ 1.99
CCM2-211ENST00000478582 EEF2KO00418 725 aaKnown RBP27.48■■□□□ 1.99
CCM2-211ENST00000478582 BUB1BO60566 1050 aaPredicted RBP27.48■■□□□ 1.99
CCM2-211ENST00000478582 ADAM23O75077 832 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 PXNP49023 591 aaPredicted RBP27.48■■□□□ 1.99
CCM2-211ENST00000478582 SULT2A1Q06520 285 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 SIM2Q14190 667 aaPredicted RBP27.48■■□□□ 1.99
CCM2-211ENST00000478582 CCDC33Q8N5R6 958 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 RTL3Q8N8U3 475 aaKnown RBP27.48■■□□□ 1.99
CCM2-211ENST00000478582 HSPH1Q92598 858 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 ACOX2Q99424 681 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 GABRG3Q99928 467 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 STAU2Q9NUL3 570 aaKnown RBP eCLIP27.48■■□□□ 1.99
CCM2-211ENST00000478582 DONSONQ9NYP3 566 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 PLA2G4CQ9UP65 541 aa27.48■■□□□ 1.99
CCM2-211ENST00000478582 SGK1O00141 431 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 KIF5AQ12840 1032 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 SRSF5Q13243 272 aaKnown RBP27.47■■□□□ 1.99
CCM2-211ENST00000478582 ZNF234Q14588 700 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 PTPRNQ16849 979 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 PPP6R3Q5H9R7 873 aaPredicted RBP27.47■■□□□ 1.99
CCM2-211ENST00000478582 LRRC38Q5VT99 294 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 SDE2Q6IQ49 451 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 C11orf63Q6NUN7 778 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 RFX8Q6ZV50 586 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 CHPFQ8IZ52 775 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 KDM1BQ8NB78 822 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 TPCN2Q8NHX9 752 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 SORCS1Q8WY21 1168 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 HHIPQ96QV1 700 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 ZDHHC4Q9NPG8 344 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 NDFIP2Q9NV92 336 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 CWC15Q9P013 229 aaKnown RBP27.47■■□□□ 1.99
CCM2-211ENST00000478582 ALG6Q9Y672 507 aa27.47■■□□□ 1.99
CCM2-211ENST00000478582 SRPRAP08240 638 aaKnown RBP27.46■■□□□ 1.99
CCM2-211ENST00000478582 GOT1P17174 413 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 VASPP50552 380 aaPredicted RBP27.46■■□□□ 1.99
CCM2-211ENST00000478582 ARSEP51690 589 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 PRR23BQ6ZRT6 265 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 TSC1Q92574 1164 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 MUC3BQ9H195 1237 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 PCDH18Q9HCL0 1135 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 RCOR3Q9P2K3 495 aaPredicted RBP27.46■■□□□ 1.99
CCM2-211ENST00000478582 STON1Q9Y6Q2 735 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 GPR179Q6PRD1 2367 aa27.46■■□□□ 1.99
CCM2-211ENST00000478582 GVINP1Q7Z2Y8 2422 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 H3BRJ5 948 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 APBB3O95704 486 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 COMTP21964 271 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 ARL4AP40617 200 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 ECT2LQ008S8 904 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 GNA12Q03113 381 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 CRY1Q16526 586 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 ATP13A4Q4VNC1 1196 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 LAIR1Q6GTX8 287 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 UMODL1-AS1Q8N2C9 162 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 CYB5D2Q8WUJ1 264 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 MRGPRX3Q96LB0 322 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 PSMB7Q99436 277 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 MAGEH1Q9H213 219 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 TMEM245Q9H330 911 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 CACNA2D2Q9NY47 1150 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 EBF1Q9UH73 591 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 DNAI1Q9UI46 699 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 VPS28Q9UK41 221 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 ERVW-1Q9UQF0 538 aa27.45■■□□□ 1.98
CCM2-211ENST00000478582 A0A0D9SEW6 157 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 AXIN1O15169 862 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 BUB1O43683 1085 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 ETFBP38117 255 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 IL12RB1P42701 662 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 DGKEP52429 567 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 CDH6P55285 790 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 YBEYP58557 167 aaPredicted RBP27.44■■□□□ 1.98
CCM2-211ENST00000478582 DPYSQ14117 519 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 PDK2Q15119 407 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 LPAL2Q16609 132 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 CEP68Q76N32 757 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 DCAF4L2Q8NA75 395 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 GAB3Q8WWW8 586 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 MYO19Q96H55 970 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 C2orf49Q9BVC5 232 aaPredicted RBP27.44■■□□□ 1.98
CCM2-211ENST00000478582 GMEB2Q9UKD1 530 aa27.44■■□□□ 1.98
CCM2-211ENST00000478582 CXorf51AA0A1B0GTR3 108 aa27.43■■□□□ 1.98
CCM2-211ENST00000478582 WASH3PC4AMC7 463 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms