RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 CDK5RAP1Q96SZ6 601 aaKnown RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SEPT5Q99719 369 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 MPP6Q9NZW5 540 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 COX16Q9P0S2 106 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 PRKAG3Q9UGI9 489 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 ZNF180Q9UJW8 692 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 LINC01553A4QN01 128 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 CCNFP41002 786 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 CCR2P41597 374 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 PAPOLAP51003 745 aaKnown RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 MTA1Q13330 715 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SERINC3Q13530 473 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 MGAT5BQ3V5L5 792 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 HEATR6Q6AI08 1181 aaKnown RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 LRRC31Q6UY01 552 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 OTOP2Q7RTS6 562 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 DEPDC1BQ8WUY9 529 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 TRIB3Q96RU7 358 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 PCDHA11Q9Y5I1 949 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 GOLGA8MH3BSY2 632 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 MUSKO15146 869 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 ZMPSTE24O75844 475 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 IFNB1P01574 187 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 HLA-DQB2P05538 268 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 DESP17661 470 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 CR2P20023 1033 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 EPHB2P29323 1055 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 MAGOHP61326 146 aaKnown RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 SLC7A9P82251 487 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 BTG3Q14201 252 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 RTL10Q7L3V2 364 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 TADA2BQ86TJ2 420 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.41□□□□□ -0.42
PRPF39-203ENST00000477626 ZYG11BQ9C0D3 744 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 MKS1Q9NXB0 559 aa12.41□□□□□ -0.42
PRPF39-203ENST00000477626 HIDE1A8MVS5 230 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 POLR3GO15318 223 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 DHRS4L1P0CG22 281 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 RAG1P15918 1043 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 TCF3P15923 654 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 IBSPP21815 317 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 MDH1P40925 334 aaKnown RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 MAPKAPK2P49137 400 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 PPP2R2AP63151 447 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 CREMQ03060 361 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 ARHGEF2Q92974 986 aaKnown RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 HMCESQ96FZ2 354 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 IMP4Q96G21 291 aaKnown RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 AGO1Q9UL18 857 aaKnown RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 INSL6Q9Y581 213 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 SLC18A2Q05940 514 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 TWF1Q12792 350 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 EFEMP1Q12805 493 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 RANBP10Q6VN20 620 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 DNAJB7Q7Z6W7 309 aaPredicted RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 MRPL43Q8N983 215 aaKnown RBP12.4□□□□□ -0.42
PRPF39-203ENST00000477626 MRGPRX2Q96LB1 330 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 RAD9AQ99638 391 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 DNMT3LQ9UJW3 386 aa12.4□□□□□ -0.42
PRPF39-203ENST00000477626 TRDMT1O14717 391 aaKnown RBP12.4□□□□□ -0.43
PRPF39-203ENST00000477626 CSH1P0DML2 217 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 CSH2P0DML3 217 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 TACR2P21452 398 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 BMPR1AP36894 532 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 KPNA1P52294 538 aaPredicted RBP12.4□□□□□ -0.43
PRPF39-203ENST00000477626 CNTN4Q8IWV2 1026 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 FBF1Q8TES7 1133 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 ATP2A3Q93084 1043 aa12.4□□□□□ -0.43
PRPF39-203ENST00000477626 CXorf51AA0A1B0GTR3 108 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ERI2A8K979 691 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 KCNK1O00180 336 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 RASGRF2O14827 1237 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 MTSS1O43312 755 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 FGBP02675 491 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 PFKLP17858 780 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ETV4P43268 484 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ARCN1P48444 511 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 NEK3P51956 506 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 TRMT10BQ6PF06 316 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 CHST9Q7L1S5 443 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ANKMY2Q8IV38 441 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 FAM76AQ8TAV0 307 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 CEP41Q9BYV8 373 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 XAB2Q9HCS7 855 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 TREX1Q9NSU2 369 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 NOVA2Q9UNW9 492 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 LOC285095A0A1B0GVY8 99 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 J3KR12 359 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 PRAMEF11O60813 436 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ATXN1LP0C7T5 689 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 SERPINB6P35237 376 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 NUGGCQ68CJ6 796 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 PSRC1Q6PGN9 363 aaPredicted RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ATP11CQ8NB49 1132 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 CELF6Q96J87 481 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 CATSPERBQ9H7T0 1116 aa12.39□□□□□ -0.43
PRPF39-203ENST00000477626 MRM3Q9HC36 420 aaKnown RBP12.39□□□□□ -0.43
PRPF39-203ENST00000477626 ACSL4O60488 711 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms