RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 PMPCAQ10713 525 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 AP5B1Q2VPB7 878 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 CBWD5Q5RIA9 395 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 MAP3K21Q5TCX8 1036 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 FAM171A1Q5VUB5 890 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 DEF8Q6ZN54 512 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 B4GALNT4Q76KP1 1039 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 UBE2Q1Q7Z7E8 422 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 GALNT7Q86SF2 657 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 TMEM217Q8N7C4 229 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 NANOGP1Q8N7R0 232 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 PIGOQ8TEQ8 1089 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 STAMQ92783 540 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 USP13Q92995 863 aaPredicted RBP3.65□□□□□ -1.83
TARDBP-208ENST00000477447 RPL36ALQ969Q0 106 aaKnown RBP3.65□□□□□ -1.83
TARDBP-208ENST00000477447 EME1Q96AY2 570 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 PPP1R10Q96QC0 940 aaKnown RBP3.65□□□□□ -1.83
TARDBP-208ENST00000477447 TUBB6Q9BUF5 446 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 CHMP4AQ9BY43 222 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 SLC29A3Q9BZD2 475 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 Q9N2J8 555 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 TUBA8Q9NY65 449 aaPredicted RBP3.65□□□□□ -1.83
TARDBP-208ENST00000477447 ZNF70Q9UC06 446 aaPredicted RBP3.65□□□□□ -1.83
TARDBP-208ENST00000477447 AGO2Q9UKV8 859 aaKnown RBP3.65□□□□□ -1.83
TARDBP-208ENST00000477447 SUFUQ9UMX1 484 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 LAMP3Q9UQV4 416 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 BTBD3Q9Y2F9 522 aa3.65□□□□□ -1.83
TARDBP-208ENST00000477447 ZMYM2Q9UBW7 1377 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 KIR2DS5A0A0G2JLQ3 304 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 CCDC189A1A4V9 331 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 KIR2DS3K7RE56 304 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 TSPAN3O60637 253 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 CNOT3O75175 753 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 NEURL1O76050 574 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 METTL18O95568 372 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 TOP3BO95985 862 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 POLBP06746 335 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 WEE2P0C1S8 567 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 MVDP53602 400 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 ARHGAP8P85298 464 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 GAD2Q05329 585 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 BYSLQ13895 437 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 RABEP1Q15276 862 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 DLGAP5Q15398 846 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 RBMS2Q15434 407 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 SMTNL2Q2TAL5 461 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 HSP90AB4PQ58FF6 505 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 ALG10Q5BKT4 473 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 ALG10BQ5I7T1 473 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 C6orf10Q5SRN2 563 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 C10orf25Q5T742 122 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 PXDC1Q5TGL8 231 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 ZKSCAN2Q63HK3 967 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 ATG16L1Q676U5 607 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 ISM2Q6H9L7 571 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 DENND1BQ6P3S1 775 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 CERS3Q8IU89 383 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 USP38Q8NB14 1042 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 HERVK_113Q902F9 699 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 VOPP1Q96AW1 172 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 COQ8BQ96D53 544 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 RNFT2Q96EX2 444 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 MASTLQ96GX5 879 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 CLMNQ96JQ2 1002 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 REEP2Q9BRK0 252 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 IFT27Q9BW83 186 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 CADM1Q9BY67 442 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 SPRTNQ9H040 489 aaPredicted RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 STN1Q9H668 368 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 THSD1Q9NS62 852 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 GTF2A1LQ9UNN4 478 aa3.64□□□□□ -1.83
TARDBP-208ENST00000477447 LRRFIP2Q9Y608 721 aaKnown RBP3.64□□□□□ -1.83
TARDBP-208ENST00000477447 TRBV5-3A0A0A0MS03 114 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 A0A1W2PPC1 479 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 C17orf100A8MU93 164 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 FOXO6A8MYZ6 492 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 PRPF4O43172 522 aaKnown RBP eCLIP3.63□□□□□ -1.832e-14■■□□□ 12.4
TARDBP-208ENST00000477447 STRNO43815 780 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 HBP1O60381 514 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 CBX6O95503 412 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 FGBP02675 491 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 KLRC2P26717 231 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 ZNF81P51508 661 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 CCR5P51681 352 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 MTX1Q13505 466 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 SEMA3AQ14563 771 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 IL13RA2Q14627 380 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 C5orf22Q49AR2 442 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 ENTPD8Q5MY95 495 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 TTC39AQ5SRH9 613 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 HMBOX1Q6NT76 420 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.63□□□□□ -1.83
TARDBP-208ENST00000477447 SCAIQ8N9R8 606 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 SLC44A5Q8NCS7 719 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 C16orf52Q8NHV5 167 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 NCSTNQ92542 709 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 MROH8Q9H579 483 aa3.63□□□□□ -1.83
TARDBP-208ENST00000477447 ACTR5Q9H9F9 607 aaPredicted RBP3.63□□□□□ -1.83
TARDBP-208ENST00000477447 IL21RQ9HBE5 538 aa3.63□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms