RNA–Protein interactions for RNA: ENST00000475832.1

MRPL55-227, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-227ENST00000475832 ZDHHC18Q9NUE0 388 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GOLGA6AQ9NYA3 693 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 MPP6Q9NZW5 540 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 CLEC1BQ9P126 229 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 KLHL8Q9P2G9 620 aaPredicted RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 DNMT3BQ9UBC3 853 aaKnown RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 MRPS23Q9Y3D9 190 aaKnown RBP12.54□□□□□ -0.4
MRPL55-227ENST00000475832 MFHAS1Q9Y4C4 1052 aa12.54□□□□□ -0.4
MRPL55-227ENST00000475832 GOLGA6L7A0A1B0GV03 622 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 RNF103O00237 685 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 CYBBP04839 570 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 ETS1P14921 441 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 DHX9Q08211 1270 aaKnown RBP12.53□□□□□ -0.4
MRPL55-227ENST00000475832 PRPSAP1Q14558 356 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 CASP8Q14790 479 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 POLD3Q15054 466 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-227ENST00000475832 TRADDQ15628 312 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
MRPL55-227ENST00000475832 C5orf22Q49AR2 442 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 SPDYCQ5MJ68 293 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 CFAP58Q5T655 872 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 NADSYN1Q6IA69 706 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 HIBCHQ6NVY1 386 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-227ENST00000475832 HTR3DQ70Z44 454 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 GRASPQ7Z6J2 395 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-227ENST00000475832 TFAP2DQ7Z6R9 452 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 NLRP14Q86W24 1093 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 ZNF683Q8IZ20 524 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 CMTM8Q8IZV2 173 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 HJURPQ8NCD3 748 aaPredicted RBP12.53□□□□□ -0.4
MRPL55-227ENST00000475832 TTC16Q8NEE8 873 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 SHKBP1Q8TBC3 707 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 VIPAS39Q9H9C1 493 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 HCFC1R1Q9NWW0 138 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 CFAP97Q9P2B7 532 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 STOML2Q9UJZ1 356 aa12.53□□□□□ -0.4
MRPL55-227ENST00000475832 A0A1B0GVM2 712 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 E2F8A0AVK6 867 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 GRXCR2A6NFK2 248 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 TCAF2A6NFQ2 919 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 H3BQ06 376 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 LEFTY2O00292 366 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 MATN3O15232 486 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 CHADO15335 359 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 PSMD3O43242 534 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 GJA1P17302 382 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 IVDP26440 423 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 OXCT1P55809 520 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ARL4CP56559 192 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 RBM10P98175 930 aaKnown RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 TEAD2Q15562 447 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 PARP6Q2NL67 630 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 FAM133BQ5BKY9 247 aaKnown RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ANKRD20A2Q5SQ80 823 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 RNASEH2BQ5TBB1 312 aaKnown RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ANKRD20A1Q5TYW2 823 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ANKRD20A3Q5VUR7 823 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 PTCRAQ6ISU1 281 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ZDHHC24Q6UX98 284 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 CENPUQ71F23 418 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 B4GALNT4Q76KP1 1039 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 PID1Q7Z2X4 250 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 SETD3Q86TU7 594 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 CCDC25Q86WR0 208 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 BBS5Q8N3I7 341 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 MREGQ8N565 214 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ZCCHC9Q8N567 271 aaKnown RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 CCDC33Q8N5R6 958 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 NPWQ8N729 165 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 GOLGA6L1Q8N7Z2 621 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 SMRP1Q8NCR6 262 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 IGSF8Q969P0 613 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 EXOC4Q96A65 974 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 TMA16Q96EY4 203 aaKnown RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 PKNOX2Q96KN3 472 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ZFRQ96KR1 1074 aaKnown RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 SLC46A2Q9BY10 475 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 SLC39A8Q9C0K1 460 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 MAGEH1Q9H213 219 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 KIF9Q9HAQ2 790 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 SP110Q9HB58 689 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 HPCAL4Q9UM19 191 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 NEU3Q9UQ49 428 aa12.52□□□□□ -0.41
MRPL55-227ENST00000475832 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.41
MRPL55-227ENST00000475832 USP34Q70CQ2 3546 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 PTPRZ1P23471 2315 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 RASA4BC9J798 803 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 SLC9A3R1O14745 358 aaPredicted RBP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 EIF3HO15372 352 aaKnown RBP eCLIP12.51□□□□□ -0.41
MRPL55-227ENST00000475832 RASA4O43374 803 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 TSPAN3O60637 253 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 CNTN5O94779 1100 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 KLKB1P03952 638 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 RHOCP08134 193 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 FAM153BP0C7A2 387 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 IL9P15248 144 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 VAV1P15498 845 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 ECHS1P30084 290 aa12.51□□□□□ -0.41
MRPL55-227ENST00000475832 HSPA9P38646 679 aaKnown RBP12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms